Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 PHGDH-210ENST00000641115 1638 ntBASIC21.91■■□□□ 1.1
RETREG2Q8NC44 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 AC018553.1-201ENST00000616682 1458 ntBASIC21.9■■□□□ 1.1
RETREG2Q8NC44 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 TERF1P1-201ENST00000311003 1181 ntBASIC21.9■■□□□ 1.1
RETREG2Q8NC44 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 TFP1-202ENST00000475455 1573 ntBASIC21.9■■□□□ 1.1
RETREG2Q8NC44 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RETREG2Q8NC44 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RETREG2Q8NC44 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RETREG2Q8NC44 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RETREG2Q8NC44 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RETREG2Q8NC44 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
RETREG2Q8NC44 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RETREG2Q8NC44 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
RETREG2Q8NC44 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
RETREG2Q8NC44 SLC25A3P1-201ENST00000443844 931 ntBASIC21.89■■□□□ 1.09
RETREG2Q8NC44 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.89■■□□□ 1.09
RETREG2Q8NC44 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.89■■□□□ 1.09
RETREG2Q8NC44 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RETREG2Q8NC44 AL031985.4-201ENST00000642138 673 ntBASIC21.89■■□□□ 1.09
RETREG2Q8NC44 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RETREG2Q8NC44 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RETREG2Q8NC44 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
RETREG2Q8NC44 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
RETREG2Q8NC44 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RETREG2Q8NC44 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.89■■□□□ 1.09
RETREG2Q8NC44 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RETREG2Q8NC44 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.88■■□□□ 1.09
RETREG2Q8NC44 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG2Q8NC44 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG2Q8NC44 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.88■■□□□ 1.09
RETREG2Q8NC44 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.88■■□□□ 1.09
RETREG2Q8NC44 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RETREG2Q8NC44 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RETREG2Q8NC44 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG2Q8NC44 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG2Q8NC44 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.88■■□□□ 1.09
RETREG2Q8NC44 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.88■■□□□ 1.09
RETREG2Q8NC44 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.88■■□□□ 1.09
RETREG2Q8NC44 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG2Q8NC44 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG2Q8NC44 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RETREG2Q8NC44 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.87■■□□□ 1.09
RETREG2Q8NC44 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RETREG2Q8NC44 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RETREG2Q8NC44 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RETREG2Q8NC44 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
RETREG2Q8NC44 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.87■■□□□ 1.09
RETREG2Q8NC44 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.87■■□□□ 1.09
RETREG2Q8NC44 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RETREG2Q8NC44 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RETREG2Q8NC44 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.87■■□□□ 1.09
RETREG2Q8NC44 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.87■■□□□ 1.09
RETREG2Q8NC44 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RETREG2Q8NC44 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.87■■□□□ 1.09
RETREG2Q8NC44 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RETREG2Q8NC44 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RETREG2Q8NC44 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RETREG2Q8NC44 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RETREG2Q8NC44 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
RETREG2Q8NC44 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
RETREG2Q8NC44 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.86■■□□□ 1.09
RETREG2Q8NC44 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RETREG2Q8NC44 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.86■■□□□ 1.09
RETREG2Q8NC44 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RETREG2Q8NC44 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.86■■□□□ 1.09
RETREG2Q8NC44 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.86■■□□□ 1.09
RETREG2Q8NC44 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.86■■□□□ 1.09
RETREG2Q8NC44 YBX1P10-201ENST00000444752 975 ntBASIC21.86■■□□□ 1.09
RETREG2Q8NC44 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RETREG2Q8NC44 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RETREG2Q8NC44 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms