Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 AC083849.1-201ENST00000615227 514 ntBASIC15.13■□□□□ 0.01
C3orf56Q8N813 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C3orf56Q8N813 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
C3orf56Q8N813 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.13■□□□□ 0.01
C3orf56Q8N813 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
C3orf56Q8N813 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.13■□□□□ 0.01
C3orf56Q8N813 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.13■□□□□ 0.01
C3orf56Q8N813 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
C3orf56Q8N813 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C3orf56Q8N813 AC242852.2-201ENST00000615738 1807 ntBASIC15.13■□□□□ 0.01
C3orf56Q8N813 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
C3orf56Q8N813 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.12■□□□□ 0.01
C3orf56Q8N813 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.12■□□□□ 0.01
C3orf56Q8N813 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
C3orf56Q8N813 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
C3orf56Q8N813 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.12■□□□□ 0.01
C3orf56Q8N813 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.12■□□□□ 0.01
C3orf56Q8N813 STARP1-201ENST00000397973 869 ntBASIC15.12■□□□□ 0.01
C3orf56Q8N813 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.12■□□□□ 0.01
C3orf56Q8N813 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.12■□□□□ 0.01
C3orf56Q8N813 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.12■□□□□ 0.01
C3orf56Q8N813 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
C3orf56Q8N813 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.12■□□□□ 0.01
C3orf56Q8N813 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.12■□□□□ 0.01
C3orf56Q8N813 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
C3orf56Q8N813 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC15.12■□□□□ 0.01
C3orf56Q8N813 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C3orf56Q8N813 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
C3orf56Q8N813 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
C3orf56Q8N813 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.11■□□□□ 0.01
C3orf56Q8N813 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.11■□□□□ 0.01
C3orf56Q8N813 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.11■□□□□ 0.01
C3orf56Q8N813 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.11■□□□□ 0.01
C3orf56Q8N813 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.11■□□□□ 0.01
C3orf56Q8N813 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.11■□□□□ 0.01
C3orf56Q8N813 PVRIG2P-201ENST00000435460 978 ntBASIC15.11■□□□□ 0.01
C3orf56Q8N813 AP000347.1-202ENST00000435868 847 ntBASIC15.11■□□□□ 0.01
C3orf56Q8N813 KRT17P6-201ENST00000453795 1220 ntBASIC15.11■□□□□ 0.01
C3orf56Q8N813 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.11■□□□□ 0.01
C3orf56Q8N813 AC023511.2-201ENST00000618803 211 ntBASIC15.11■□□□□ 0.01
C3orf56Q8N813 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C3orf56Q8N813 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C3orf56Q8N813 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.1■□□□□ 0.01
C3orf56Q8N813 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C3orf56Q8N813 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
C3orf56Q8N813 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C3orf56Q8N813 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.1■□□□□ 0.01
C3orf56Q8N813 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C3orf56Q8N813 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.1■□□□□ 0.01
C3orf56Q8N813 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C3orf56Q8N813 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C3orf56Q8N813 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C3orf56Q8N813 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.1■□□□□ 0.01
C3orf56Q8N813 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.1■□□□□ 0.01
C3orf56Q8N813 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.1■□□□□ 0.01
C3orf56Q8N813 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.1■□□□□ 0.01
C3orf56Q8N813 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.1■□□□□ 0.01
C3orf56Q8N813 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.1■□□□□ 0.01
C3orf56Q8N813 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C3orf56Q8N813 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
C3orf56Q8N813 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms