Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 AP003071.4-201ENST00000562276 1284 ntBASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDH20Q8N6Y1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 AC026271.3-201ENST00000571884 352 ntBASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 HLA-A-209ENST00000638375 975 ntBASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 AL031985.4-201ENST00000642138 673 ntBASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDH20Q8N6Y1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDH20Q8N6Y1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDH20Q8N6Y1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH20Q8N6Y1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH20Q8N6Y1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDH20Q8N6Y1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH20Q8N6Y1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH20Q8N6Y1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH20Q8N6Y1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PCDH20Q8N6Y1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH20Q8N6Y1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDH20Q8N6Y1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDH20Q8N6Y1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PCDH20Q8N6Y1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 AC131212.4-201ENST00000623606 975 ntBASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDH20Q8N6Y1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 AC004980.1-204ENST00000429707 299 ntBASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDH20Q8N6Y1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms