Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
VPS8Q8N3P4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
VPS8Q8N3P4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
VPS8Q8N3P4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
VPS8Q8N3P4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
VPS8Q8N3P4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC30.32■■■□□ 2.44
VPS8Q8N3P4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC30.32■■■□□ 2.44
VPS8Q8N3P4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC30.32■■■□□ 2.44
VPS8Q8N3P4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
VPS8Q8N3P4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
VPS8Q8N3P4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC30.32■■■□□ 2.44
VPS8Q8N3P4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
VPS8Q8N3P4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
VPS8Q8N3P4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
VPS8Q8N3P4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
VPS8Q8N3P4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
VPS8Q8N3P4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 DUT-205ENST00000558813 769 ntTSL 2 BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 C2orf69P3-201ENST00000565542 1120 ntBASIC30.31■■■□□ 2.44
VPS8Q8N3P4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
VPS8Q8N3P4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
VPS8Q8N3P4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
VPS8Q8N3P4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC30.29■■■□□ 2.44
VPS8Q8N3P4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
VPS8Q8N3P4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC30.29■■■□□ 2.44
VPS8Q8N3P4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
VPS8Q8N3P4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC30.29■■■□□ 2.44
VPS8Q8N3P4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC30.29■■■□□ 2.44
VPS8Q8N3P4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC30.29■■■□□ 2.44
VPS8Q8N3P4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
VPS8Q8N3P4 TSPY21P-201ENST00000433481 731 ntBASIC30.29■■■□□ 2.44
VPS8Q8N3P4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
VPS8Q8N3P4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
VPS8Q8N3P4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC30.28■■■□□ 2.44
VPS8Q8N3P4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC30.28■■■□□ 2.44
VPS8Q8N3P4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
VPS8Q8N3P4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
VPS8Q8N3P4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC30.28■■■□□ 2.44
VPS8Q8N3P4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC30.28■■■□□ 2.44
VPS8Q8N3P4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC30.28■■■□□ 2.44
VPS8Q8N3P4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC30.28■■■□□ 2.44
VPS8Q8N3P4 INGX-201ENST00000359239 846 ntBASIC30.28■■■□□ 2.44
VPS8Q8N3P4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC30.28■■■□□ 2.44
VPS8Q8N3P4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC30.28■■■□□ 2.44
VPS8Q8N3P4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC30.28■■■□□ 2.44
VPS8Q8N3P4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC30.28■■■□□ 2.44
VPS8Q8N3P4 FAM87A-204ENST00000613235 858 ntBASIC30.28■■■□□ 2.44
VPS8Q8N3P4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC30.28■■■□□ 2.44
VPS8Q8N3P4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC30.28■■■□□ 2.44
VPS8Q8N3P4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC30.28■■■□□ 2.44
VPS8Q8N3P4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
VPS8Q8N3P4 TEX21P-204ENST00000641479 1693 ntBASIC30.27■■■□□ 2.44
VPS8Q8N3P4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC30.27■■■□□ 2.44
VPS8Q8N3P4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
VPS8Q8N3P4 RCN1P1-201ENST00000400413 996 ntBASIC30.27■■■□□ 2.44
VPS8Q8N3P4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC30.27■■■□□ 2.44
VPS8Q8N3P4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
VPS8Q8N3P4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
VPS8Q8N3P4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
VPS8Q8N3P4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
VPS8Q8N3P4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC30.26■■■□□ 2.44
VPS8Q8N3P4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
VPS8Q8N3P4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC30.26■■■□□ 2.43
VPS8Q8N3P4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
VPS8Q8N3P4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
VPS8Q8N3P4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC30.26■■■□□ 2.43
VPS8Q8N3P4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC30.26■■■□□ 2.43
VPS8Q8N3P4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC30.26■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms