Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BEST3Q8N1M1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BEST3Q8N1M1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.95■□□□□ 0.46
BEST3Q8N1M1 KRT8P8-201ENST00000434750 1448 ntBASIC17.95■□□□□ 0.46
BEST3Q8N1M1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST3Q8N1M1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
BEST3Q8N1M1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST3Q8N1M1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST3Q8N1M1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.95■□□□□ 0.46
BEST3Q8N1M1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.95■□□□□ 0.46
BEST3Q8N1M1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST3Q8N1M1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.95■□□□□ 0.46
BEST3Q8N1M1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST3Q8N1M1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 AL162377.1-201ENST00000618844 1793 ntBASIC17.94■□□□□ 0.46
BEST3Q8N1M1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 NAPSB-206ENST00000562112 1266 ntBASIC17.94■□□□□ 0.46
BEST3Q8N1M1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.94■□□□□ 0.46
BEST3Q8N1M1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 CYP2D8P-201ENST00000433633 1490 ntBASIC17.94■□□□□ 0.46
BEST3Q8N1M1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
BEST3Q8N1M1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 RCN1P1-201ENST00000400413 996 ntBASIC17.93■□□□□ 0.46
BEST3Q8N1M1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 AC145285.6-201ENST00000604632 637 ntBASIC17.93■□□□□ 0.46
BEST3Q8N1M1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST3Q8N1M1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 LINC01568-207ENST00000641790 1380 ntBASIC17.92■□□□□ 0.46
BEST3Q8N1M1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 MIR1224-201ENST00000408193 85 ntBASIC17.92■□□□□ 0.46
BEST3Q8N1M1 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.92■□□□□ 0.46
BEST3Q8N1M1 DGCR10-201ENST00000609839 495 ntBASIC17.92■□□□□ 0.46
BEST3Q8N1M1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.92■□□□□ 0.46
BEST3Q8N1M1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms