Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIX5Q8N196 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
SIX5Q8N196 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIX5Q8N196 AF106564.1-201ENST00000607058 2553 ntBASIC19.8■□□□□ 0.76
SIX5Q8N196 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
SIX5Q8N196 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIX5Q8N196 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.8■□□□□ 0.76
SIX5Q8N196 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.8■□□□□ 0.76
SIX5Q8N196 PRELID1P1-202ENST00000567272 903 ntBASIC19.8■□□□□ 0.76
SIX5Q8N196 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.8■□□□□ 0.76
SIX5Q8N196 AC092119.3-201ENST00000612618 583 ntBASIC19.8■□□□□ 0.76
SIX5Q8N196 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIX5Q8N196 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SIX5Q8N196 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIX5Q8N196 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIX5Q8N196 LINC00565-201ENST00000562710 2331 ntBASIC19.8■□□□□ 0.76
SIX5Q8N196 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIX5Q8N196 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIX5Q8N196 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIX5Q8N196 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SIX5Q8N196 PLK5-205ENST00000642079 1969 ntBASIC19.79■□□□□ 0.76
SIX5Q8N196 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SIX5Q8N196 AC092667.1-201ENST00000434301 2586 ntBASIC19.79■□□□□ 0.76
SIX5Q8N196 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.79■□□□□ 0.76
SIX5Q8N196 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIX5Q8N196 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIX5Q8N196 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SIX5Q8N196 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SIX5Q8N196 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.79■□□□□ 0.76
SIX5Q8N196 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SIX5Q8N196 MIR3652-201ENST00000579335 131 ntBASIC19.79■□□□□ 0.76
SIX5Q8N196 HYMAI.1-201ENST00000620949 238 ntBASIC19.79■□□□□ 0.76
SIX5Q8N196 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SIX5Q8N196 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIX5Q8N196 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SIX5Q8N196 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SIX5Q8N196 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIX5Q8N196 TMEM179-206ENST00000616017 1645 ntBASIC19.79■□□□□ 0.76
SIX5Q8N196 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.79■□□□□ 0.76
SIX5Q8N196 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIX5Q8N196 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIX5Q8N196 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIX5Q8N196 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIX5Q8N196 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIX5Q8N196 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SIX5Q8N196 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SIX5Q8N196 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SIX5Q8N196 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SIX5Q8N196 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.78■□□□□ 0.76
SIX5Q8N196 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SIX5Q8N196 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX5Q8N196 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX5Q8N196 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
SIX5Q8N196 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SIX5Q8N196 STARP1-201ENST00000397973 869 ntBASIC19.78■□□□□ 0.76
SIX5Q8N196 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.78■□□□□ 0.76
SIX5Q8N196 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.78■□□□□ 0.76
SIX5Q8N196 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.78■□□□□ 0.76
SIX5Q8N196 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.78■□□□□ 0.76
SIX5Q8N196 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SIX5Q8N196 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SIX5Q8N196 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX5Q8N196 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX5Q8N196 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SIX5Q8N196 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.78■□□□□ 0.76
SIX5Q8N196 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX5Q8N196 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SIX5Q8N196 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX5Q8N196 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIX5Q8N196 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.77■□□□□ 0.76
SIX5Q8N196 KRT8P8-201ENST00000434750 1448 ntBASIC19.77■□□□□ 0.76
SIX5Q8N196 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIX5Q8N196 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIX5Q8N196 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.77■□□□□ 0.76
SIX5Q8N196 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIX5Q8N196 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIX5Q8N196 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIX5Q8N196 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIX5Q8N196 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIX5Q8N196 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SIX5Q8N196 FDX1P1-201ENST00000449115 551 ntBASIC19.77■□□□□ 0.76
SIX5Q8N196 GCSHP2-201ENST00000560971 527 ntBASIC19.77■□□□□ 0.76
SIX5Q8N196 AL160286.2-201ENST00000567150 934 ntBASIC19.77■□□□□ 0.76
SIX5Q8N196 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIX5Q8N196 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SIX5Q8N196 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SIX5Q8N196 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SIX5Q8N196 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIX5Q8N196 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
SIX5Q8N196 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.76■□□□□ 0.75
SIX5Q8N196 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SIX5Q8N196 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.76■□□□□ 0.75
SIX5Q8N196 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.76■□□□□ 0.75
SIX5Q8N196 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX5Q8N196 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SIX5Q8N196 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SIX5Q8N196 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.76■□□□□ 0.75
SIX5Q8N196 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.76■□□□□ 0.75
SIX5Q8N196 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SIX5Q8N196 AL845331.1-201ENST00000424978 1190 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms