Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 AL162377.1-201ENST00000618844 1793 ntBASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 LINC01311-201ENST00000565162 1445 ntBASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COL27A1Q8IZC6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 MIR3180-1-201ENST00000580374 94 ntBASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 MIR3180-3-201ENST00000584616 94 ntBASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 AL031432.5-201ENST00000641059 760 ntBASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.27■□□□□ 0.52
COL27A1Q8IZC6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
COL27A1Q8IZC6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 AL645929.1-201ENST00000420084 975 ntBASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL27A1Q8IZC6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL27A1Q8IZC6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
COL27A1Q8IZC6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.25■□□□□ 0.51
COL27A1Q8IZC6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.25■□□□□ 0.51
COL27A1Q8IZC6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.25■□□□□ 0.51
COL27A1Q8IZC6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL27A1Q8IZC6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.25■□□□□ 0.51
COL27A1Q8IZC6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL27A1Q8IZC6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
COL27A1Q8IZC6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL27A1Q8IZC6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.25■□□□□ 0.51
COL27A1Q8IZC6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL27A1Q8IZC6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL27A1Q8IZC6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms