Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 TSPY15P-201ENST00000457163 923 ntBASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 FSCN1P1-201ENST00000568912 1481 ntBASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C9orf40Q8IXQ3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 KRT8P41-201ENST00000533985 1514 ntBASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.87■□□□□ 0.45
C9orf40Q8IXQ3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 AC004951.3-201ENST00000418645 1148 ntBASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 AC008040.2-201ENST00000461049 708 ntBASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 AC011298.2-201ENST00000617989 482 ntBASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
C9orf40Q8IXQ3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
C9orf40Q8IXQ3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms