Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM50Q86XT4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM50Q86XT4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM50Q86XT4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM50Q86XT4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM50Q86XT4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM50Q86XT4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM50Q86XT4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.05
TRIM50Q86XT4 DUX4L26-201ENST00000489078 1255 ntBASIC21.58■■□□□ 1.05
TRIM50Q86XT4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.58■■□□□ 1.05
TRIM50Q86XT4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.58■■□□□ 1.05
TRIM50Q86XT4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.58■■□□□ 1.05
TRIM50Q86XT4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM50Q86XT4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM50Q86XT4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
TRIM50Q86XT4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.58■■□□□ 1.04
TRIM50Q86XT4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.58■■□□□ 1.04
TRIM50Q86XT4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 ARMC10P1-201ENST00000313754 855 ntBASIC21.57■■□□□ 1.04
TRIM50Q86XT4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 ATP5G1P1-201ENST00000448724 379 ntBASIC21.57■■□□□ 1.04
TRIM50Q86XT4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
TRIM50Q86XT4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM50Q86XT4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM50Q86XT4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.56■■□□□ 1.04
TRIM50Q86XT4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM50Q86XT4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TRIM50Q86XT4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM50Q86XT4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TRIM50Q86XT4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM50Q86XT4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM50Q86XT4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM50Q86XT4 LIN28AP1-201ENST00000429574 405 ntBASIC21.56■■□□□ 1.04
TRIM50Q86XT4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM50Q86XT4 AC128688.1-201ENST00000487626 519 ntBASIC21.56■■□□□ 1.04
TRIM50Q86XT4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.56■■□□□ 1.04
TRIM50Q86XT4 AL590326.2-201ENST00000625139 305 ntBASIC21.56■■□□□ 1.04
TRIM50Q86XT4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
TRIM50Q86XT4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.56■■□□□ 1.04
TRIM50Q86XT4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
TRIM50Q86XT4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
TRIM50Q86XT4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 AC116562.4-202ENST00000641738 218 ntBASIC21.54■■□□□ 1.04
TRIM50Q86XT4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.54■■□□□ 1.04
TRIM50Q86XT4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms