Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC28Q86X40 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC28Q86X40 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC28Q86X40 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LRRC28Q86X40 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC28Q86X40 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC28Q86X40 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC28Q86X40 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC28Q86X40 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRC28Q86X40 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC28Q86X40 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC28Q86X40 AC135050.7-201ENST00000624508 2218 ntBASIC17.19■□□□□ 0.34
LRRC28Q86X40 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC28Q86X40 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LRRC28Q86X40 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC28Q86X40 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC28Q86X40 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC28Q86X40 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 AC009113.1-201ENST00000570267 2443 ntBASIC17.18■□□□□ 0.34
LRRC28Q86X40 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC28Q86X40 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC28Q86X40 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC28Q86X40 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 AC097658.1-201ENST00000475555 843 ntBASIC17.18■□□□□ 0.34
LRRC28Q86X40 AC098934.4-201ENST00000564127 592 ntBASIC17.18■□□□□ 0.34
LRRC28Q86X40 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC28Q86X40 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC28Q86X40 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC28Q86X40 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC28Q86X40 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC28Q86X40 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 CYP21A1P-202ENST00000354927 1481 ntBASIC17.18■□□□□ 0.34
LRRC28Q86X40 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC28Q86X40 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC28Q86X40 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 KRT18P6-201ENST00000555540 1265 ntBASIC17.17■□□□□ 0.34
LRRC28Q86X40 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 AL589743.5-201ENST00000616611 1050 ntBASIC17.17■□□□□ 0.34
LRRC28Q86X40 AC104581.1-202ENST00000635932 2618 ntBASIC17.17■□□□□ 0.34
LRRC28Q86X40 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC28Q86X40 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC28Q86X40 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LRRC28Q86X40 KRT17P1-201ENST00000399211 1546 ntBASIC17.16■□□□□ 0.34
LRRC28Q86X40 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC28Q86X40 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRC28Q86X40 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRRC28Q86X40 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC28Q86X40 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC28Q86X40 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC28Q86X40 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC28Q86X40 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC28Q86X40 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC28Q86X40 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms