Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD1LQ86WJ1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CHD1LQ86WJ1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD1LQ86WJ1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.91■■□□□ 1.42
CHD1LQ86WJ1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.91■■□□□ 1.42
CHD1LQ86WJ1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD1LQ86WJ1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD1LQ86WJ1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD1LQ86WJ1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CHD1LQ86WJ1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD1LQ86WJ1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD1LQ86WJ1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD1LQ86WJ1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD1LQ86WJ1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CHD1LQ86WJ1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD1LQ86WJ1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 AP003097.1-201ENST00000530657 1135 ntBASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
CHD1LQ86WJ1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CHD1LQ86WJ1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC23.89■■□□□ 1.42
CHD1LQ86WJ1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
CHD1LQ86WJ1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.89■■□□□ 1.42
CHD1LQ86WJ1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CHD1LQ86WJ1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CHD1LQ86WJ1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
CHD1LQ86WJ1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 AC233263.1-201ENST00000578059 224 ntBASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 MTDHP1-201ENST00000605323 784 ntBASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 CROCCP3-202ENST00000420820 1947 ntBASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.88■■□□□ 1.41
CHD1LQ86WJ1 NBPF21P-201ENST00000425093 1451 ntBASIC23.87■■□□□ 1.41
CHD1LQ86WJ1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1LQ86WJ1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1LQ86WJ1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1LQ86WJ1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1LQ86WJ1 AC006333.2-201ENST00000607957 2099 ntBASIC23.87■■□□□ 1.41
CHD1LQ86WJ1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1LQ86WJ1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CHD1LQ86WJ1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
CHD1LQ86WJ1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1LQ86WJ1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.87■■□□□ 1.41
CHD1LQ86WJ1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
CHD1LQ86WJ1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CHD1LQ86WJ1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.87■■□□□ 1.41
CHD1LQ86WJ1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms