Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.67■□□□□ 0.74
CROCCP2Q86T23 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 MKRN4P-201ENST00000444706 1521 ntBASIC19.66■□□□□ 0.74
CROCCP2Q86T23 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 ZNF815P-204ENST00000434898 1737 ntBASIC19.66■□□□□ 0.74
CROCCP2Q86T23 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 TERF1P2-201ENST00000583350 1212 ntBASIC19.66■□□□□ 0.74
CROCCP2Q86T23 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 AL512353.2-201ENST00000448759 1962 ntBASIC19.66■□□□□ 0.74
CROCCP2Q86T23 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP2Q86T23 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 MCRIP2P1-201ENST00000394346 511 ntBASIC19.65■□□□□ 0.74
CROCCP2Q86T23 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 PCDHB18P-201ENST00000524813 2368 ntBASIC19.65■□□□□ 0.74
CROCCP2Q86T23 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 IRX1P1-201ENST00000438849 1838 ntBASIC19.65■□□□□ 0.74
CROCCP2Q86T23 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.65■□□□□ 0.74
CROCCP2Q86T23 FP475955.4-201ENST00000623131 1990 ntBASIC19.64■□□□□ 0.74
CROCCP2Q86T23 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CROCCP2Q86T23 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.64■□□□□ 0.73
CROCCP2Q86T23 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CROCCP2Q86T23 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CROCCP2Q86T23 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CROCCP2Q86T23 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CROCCP2Q86T23 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CROCCP2Q86T23 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CROCCP2Q86T23 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.64■□□□□ 0.73
CROCCP2Q86T23 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.64■□□□□ 0.73
CROCCP2Q86T23 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.64■□□□□ 0.73
CROCCP2Q86T23 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.64■□□□□ 0.73
CROCCP2Q86T23 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CROCCP2Q86T23 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.64■□□□□ 0.73
CROCCP2Q86T23 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CROCCP2Q86T23 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CROCCP2Q86T23 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CROCCP2Q86T23 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP2Q86T23 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CROCCP2Q86T23 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CROCCP2Q86T23 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.62■□□□□ 0.73
CROCCP2Q86T23 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.62■□□□□ 0.73
CROCCP2Q86T23 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CROCCP2Q86T23 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CROCCP2Q86T23 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CROCCP2Q86T23 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.62■□□□□ 0.73
CROCCP2Q86T23 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.62■□□□□ 0.73
CROCCP2Q86T23 AC018470.1-201ENST00000624790 3129 ntBASIC19.62■□□□□ 0.73
CROCCP2Q86T23 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms