Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 AC141257.4-201ENST00000634557 245 ntBASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 AC136944.6-201ENST00000634818 245 ntBASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 KRT8P41-201ENST00000533985 1514 ntBASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 PCDHAC2-203ENST00000615316 3011 ntBASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 SLC25A1P2-201ENST00000430693 912 ntBASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 AC116562.4-202ENST00000641738 218 ntBASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.53■□□□□ 0.24
RAI1Q7Z5J4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAI1Q7Z5J4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI1Q7Z5J4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI1Q7Z5J4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
RAI1Q7Z5J4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAI1Q7Z5J4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RAI1Q7Z5J4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAI1Q7Z5J4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI1Q7Z5J4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.52■□□□□ 0.24
RAI1Q7Z5J4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI1Q7Z5J4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI1Q7Z5J4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI1Q7Z5J4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI1Q7Z5J4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI1Q7Z5J4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAI1Q7Z5J4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAI1Q7Z5J4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.52■□□□□ 0.24
RAI1Q7Z5J4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.52■□□□□ 0.23
RAI1Q7Z5J4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.52■□□□□ 0.23
RAI1Q7Z5J4 AL160286.2-201ENST00000567150 934 ntBASIC16.52■□□□□ 0.23
RAI1Q7Z5J4 AC130371.2-201ENST00000619443 611 ntBASIC16.52■□□□□ 0.23
RAI1Q7Z5J4 AP000550.4-202ENST00000639755 178 ntBASIC16.52■□□□□ 0.23
RAI1Q7Z5J4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
RAI1Q7Z5J4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAI1Q7Z5J4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 AP003041.3-201ENST00000527151 707 ntBASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RAI1Q7Z5J4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms