Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 AC004980.1-204ENST00000429707 299 ntBASIC18.57■□□□□ 0.56
RNF44Q7L0R7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 AC026271.3-201ENST00000571884 352 ntBASIC18.57■□□□□ 0.56
RNF44Q7L0R7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 AC026471.5-201ENST00000615068 467 ntBASIC18.57■□□□□ 0.56
RNF44Q7L0R7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF44Q7L0R7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 HCG11-201ENST00000411553 5696 ntBASIC18.56■□□□□ 0.56
RNF44Q7L0R7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 NUDT16P1-203ENST00000513809 620 ntBASIC18.56■□□□□ 0.56
RNF44Q7L0R7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF44Q7L0R7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 AC125437.2-201ENST00000625180 2167 ntBASIC18.55■□□□□ 0.56
RNF44Q7L0R7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.55■□□□□ 0.56
RNF44Q7L0R7 AL031985.4-201ENST00000642138 673 ntBASIC18.55■□□□□ 0.56
RNF44Q7L0R7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 SLC25A24-204ENST00000569674 2357 ntBASIC18.55■□□□□ 0.56
RNF44Q7L0R7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 TREX1-205ENST00000625293 1783 ntBASIC18.55■□□□□ 0.56
RNF44Q7L0R7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RNF44Q7L0R7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 KRT17P2-201ENST00000300992 1314 ntBASIC18.54■□□□□ 0.56
RNF44Q7L0R7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 AC131212.4-201ENST00000623606 975 ntBASIC18.54■□□□□ 0.56
RNF44Q7L0R7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms