Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 AP000867.3-201ENST00000524675 377 ntBASIC29.52■■■□□ 2.32
CD109Q6YHK3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC29.52■■■□□ 2.32
CD109Q6YHK3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC29.52■■■□□ 2.32
CD109Q6YHK3 AL121912.1-201ENST00000603683 238 ntBASIC29.52■■■□□ 2.32
CD109Q6YHK3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC29.52■■■□□ 2.32
CD109Q6YHK3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC29.51■■■□□ 2.31
CD109Q6YHK3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
CD109Q6YHK3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC29.51■■■□□ 2.31
CD109Q6YHK3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
CD109Q6YHK3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
CD109Q6YHK3 LINC00265-3P-201ENST00000447588 903 ntBASIC29.51■■■□□ 2.31
CD109Q6YHK3 AC079602.3-201ENST00000623931 403 ntBASIC29.51■■■□□ 2.31
CD109Q6YHK3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CD109Q6YHK3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC29.51■■■□□ 2.31
CD109Q6YHK3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC29.5■■■□□ 2.31
CD109Q6YHK3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CD109Q6YHK3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC29.5■■■□□ 2.31
CD109Q6YHK3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC29.5■■■□□ 2.31
CD109Q6YHK3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC29.5■■■□□ 2.31
CD109Q6YHK3 KRT18P13-201ENST00000400056 1290 ntBASIC29.5■■■□□ 2.31
CD109Q6YHK3 HLA-F-220ENST00000434407 884 ntBASIC29.5■■■□□ 2.31
CD109Q6YHK3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC29.5■■■□□ 2.31
CD109Q6YHK3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC29.5■■■□□ 2.31
CD109Q6YHK3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CD109Q6YHK3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC29.49■■■□□ 2.31
CD109Q6YHK3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CD109Q6YHK3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CD109Q6YHK3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CD109Q6YHK3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
CD109Q6YHK3 PMS2P1-201ENST00000431037 1228 ntBASIC29.49■■■□□ 2.31
CD109Q6YHK3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC29.49■■■□□ 2.31
CD109Q6YHK3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CD109Q6YHK3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
CD109Q6YHK3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC29.49■■■□□ 2.31
CD109Q6YHK3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CD109Q6YHK3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC29.49■■■□□ 2.31
CD109Q6YHK3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CD109Q6YHK3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC29.48■■■□□ 2.31
CD109Q6YHK3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CD109Q6YHK3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC29.48■■■□□ 2.31
CD109Q6YHK3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CD109Q6YHK3 KRT16P4-201ENST00000453883 522 ntBASIC29.48■■■□□ 2.31
CD109Q6YHK3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC29.48■■■□□ 2.31
CD109Q6YHK3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC29.48■■■□□ 2.31
CD109Q6YHK3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC29.48■■■□□ 2.31
CD109Q6YHK3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CD109Q6YHK3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CD109Q6YHK3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC29.48■■■□□ 2.31
CD109Q6YHK3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
CD109Q6YHK3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC29.48■■■□□ 2.31
CD109Q6YHK3 AC092720.2-201ENST00000602388 1665 ntBASIC29.48■■■□□ 2.31
CD109Q6YHK3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC29.48■■■□□ 2.31
CD109Q6YHK3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC29.47■■■□□ 2.31
CD109Q6YHK3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
CD109Q6YHK3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CD109Q6YHK3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
CD109Q6YHK3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC29.47■■■□□ 2.31
CD109Q6YHK3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC29.47■■■□□ 2.31
CD109Q6YHK3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
CD109Q6YHK3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC29.47■■■□□ 2.31
CD109Q6YHK3 TOB2P1-201ENST00000469761 992 ntBASIC29.47■■■□□ 2.31
CD109Q6YHK3 PENK-208ENST00000523051 772 ntTSL 5 BASIC29.47■■■□□ 2.31
CD109Q6YHK3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC29.47■■■□□ 2.31
CD109Q6YHK3 NME4-212ENST00000621774 904 ntTSL 3 BASIC29.47■■■□□ 2.31
CD109Q6YHK3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
CD109Q6YHK3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC29.47■■■□□ 2.31
CD109Q6YHK3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CD109Q6YHK3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CD109Q6YHK3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CD109Q6YHK3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CD109Q6YHK3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC29.47■■■□□ 2.31
CD109Q6YHK3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
CD109Q6YHK3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CD109Q6YHK3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC29.46■■■□□ 2.31
CD109Q6YHK3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CD109Q6YHK3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CD109Q6YHK3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CD109Q6YHK3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
CD109Q6YHK3 TSPY22P-201ENST00000427496 604 ntBASIC29.46■■■□□ 2.31
CD109Q6YHK3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
CD109Q6YHK3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC29.46■■■□□ 2.31
CD109Q6YHK3 AC024243.1-201ENST00000609234 778 ntBASIC29.46■■■□□ 2.31
CD109Q6YHK3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
CD109Q6YHK3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CD109Q6YHK3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC29.46■■■□□ 2.31
CD109Q6YHK3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CD109Q6YHK3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CD109Q6YHK3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CD109Q6YHK3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC29.46■■■□□ 2.31
CD109Q6YHK3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC29.45■■■□□ 2.31
CD109Q6YHK3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC29.45■■■□□ 2.31
CD109Q6YHK3 LINC01711-201ENST00000598340 967 ntBASIC29.45■■■□□ 2.31
CD109Q6YHK3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.31
CD109Q6YHK3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CD109Q6YHK3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CD109Q6YHK3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC29.45■■■□□ 2.31
CD109Q6YHK3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.3
CD109Q6YHK3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CD109Q6YHK3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CD109Q6YHK3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC29.45■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms