Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RNF213Q63HN8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
RNF213Q63HN8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC10.37□□□□□ -0.75
RNF213Q63HN8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RNF213Q63HN8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RNF213Q63HN8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
RNF213Q63HN8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RNF213Q63HN8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
RNF213Q63HN8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC10.37□□□□□ -0.75
RNF213Q63HN8 AC011467.4-201ENST00000594891 528 ntBASIC10.37□□□□□ -0.75
RNF213Q63HN8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC10.37□□□□□ -0.75
RNF213Q63HN8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
RNF213Q63HN8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
RNF213Q63HN8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RNF213Q63HN8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RNF213Q63HN8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC10.37□□□□□ -0.75
RNF213Q63HN8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC10.37□□□□□ -0.75
RNF213Q63HN8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RNF213Q63HN8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC10.37□□□□□ -0.75
RNF213Q63HN8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
RNF213Q63HN8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC10.37□□□□□ -0.75
RNF213Q63HN8 SCARNA2-201ENST00000458748 420 ntBASIC10.37□□□□□ -0.75
RNF213Q63HN8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC10.37□□□□□ -0.75
RNF213Q63HN8 AL356488.2-201ENST00000602755 427 ntBASIC10.37□□□□□ -0.75
RNF213Q63HN8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
RNF213Q63HN8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RNF213Q63HN8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RNF213Q63HN8 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RNF213Q63HN8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
RNF213Q63HN8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
RNF213Q63HN8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
RNF213Q63HN8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
RNF213Q63HN8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
RNF213Q63HN8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
RNF213Q63HN8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC10.36□□□□□ -0.75
RNF213Q63HN8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RNF213Q63HN8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RNF213Q63HN8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC10.36□□□□□ -0.75
RNF213Q63HN8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC10.36□□□□□ -0.75
RNF213Q63HN8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RNF213Q63HN8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RNF213Q63HN8 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RNF213Q63HN8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RNF213Q63HN8 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC10.36□□□□□ -0.75
RNF213Q63HN8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC10.36□□□□□ -0.75
RNF213Q63HN8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC10.36□□□□□ -0.75
RNF213Q63HN8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC10.36□□□□□ -0.75
RNF213Q63HN8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RNF213Q63HN8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
RNF213Q63HN8 AC092474.2-201ENST00000424288 719 ntBASIC10.36□□□□□ -0.75
RNF213Q63HN8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC10.36□□□□□ -0.75
RNF213Q63HN8 AC018712.1-201ENST00000455767 687 ntBASIC10.36□□□□□ -0.75
RNF213Q63HN8 PARP8-206ENST00000503665 572 ntTSL 4 BASIC10.36□□□□□ -0.75
RNF213Q63HN8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC10.36□□□□□ -0.75
RNF213Q63HN8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC10.36□□□□□ -0.75
RNF213Q63HN8 AC099336.1-202ENST00000602961 463 ntBASIC10.36□□□□□ -0.75
RNF213Q63HN8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RNF213Q63HN8 LINC01465-201ENST00000408887 1940 ntBASIC10.36□□□□□ -0.75
RNF213Q63HN8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC10.35□□□□□ -0.75
RNF213Q63HN8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC10.35□□□□□ -0.75
RNF213Q63HN8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 EMD-201ENST00000369835 966 ntTSL 3 BASIC10.35□□□□□ -0.75
RNF213Q63HN8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
RNF213Q63HN8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC10.35□□□□□ -0.75
RNF213Q63HN8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 MIR662-201ENST00000384847 95 ntBASIC10.35□□□□□ -0.75
RNF213Q63HN8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC10.35□□□□□ -0.75
RNF213Q63HN8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC10.35□□□□□ -0.75
RNF213Q63HN8 KRT18P3-201ENST00000451602 1288 ntBASIC10.35□□□□□ -0.75
RNF213Q63HN8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC10.35□□□□□ -0.75
RNF213Q63HN8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC10.35□□□□□ -0.75
RNF213Q63HN8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC10.35□□□□□ -0.75
RNF213Q63HN8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC10.35□□□□□ -0.75
RNF213Q63HN8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 TMEM179-206ENST00000616017 1645 ntBASIC10.35□□□□□ -0.75
RNF213Q63HN8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RNF213Q63HN8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC10.35□□□□□ -0.75
RNF213Q63HN8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC10.34□□□□□ -0.75
RNF213Q63HN8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC10.34□□□□□ -0.75
RNF213Q63HN8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RNF213Q63HN8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC10.34□□□□□ -0.75
RNF213Q63HN8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RNF213Q63HN8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RNF213Q63HN8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RNF213Q63HN8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
RNF213Q63HN8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms