Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.02■□□□□ 0.96
PRPF38BQ5VTL8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PRPF38BQ5VTL8 AL049840.3-201ENST00000602669 611 ntBASIC21.02■□□□□ 0.96
PRPF38BQ5VTL8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRPF38BQ5VTL8 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.02■□□□□ 0.95
PRPF38BQ5VTL8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PRPF38BQ5VTL8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 AC233702.3-201ENST00000578656 1387 ntBASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 KRT16P6-202ENST00000425692 1426 ntBASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRPF38BQ5VTL8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 AC012676.1-201ENST00000574705 1949 ntBASIC21■□□□□ 0.95
PRPF38BQ5VTL8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 MIR770-201ENST00000390219 98 ntBASIC21■□□□□ 0.95
PRPF38BQ5VTL8 COA5-202ENST00000409997 557 ntTSL 4 BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 PON3-203ENST00000427422 894 ntTSL 3 BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 AC018712.1-201ENST00000455767 687 ntBASIC21■□□□□ 0.95
PRPF38BQ5VTL8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 AC145285.3-201ENST00000564603 959 ntBASIC21■□□□□ 0.95
PRPF38BQ5VTL8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21■□□□□ 0.95
PRPF38BQ5VTL8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 TFP1-202ENST00000475455 1573 ntBASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 MIR662-201ENST00000384847 95 ntBASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 AP006288.1-201ENST00000446065 395 ntBASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 IGHV3-22-201ENST00000520721 359 ntBASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRPF38BQ5VTL8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF38BQ5VTL8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF38BQ5VTL8 AL117328.2-201ENST00000624617 1940 ntBASIC20.98■□□□□ 0.95
PRPF38BQ5VTL8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF38BQ5VTL8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.98■□□□□ 0.95
PRPF38BQ5VTL8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.98■□□□□ 0.95
PRPF38BQ5VTL8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.98■□□□□ 0.95
PRPF38BQ5VTL8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.98■□□□□ 0.95
PRPF38BQ5VTL8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.98■□□□□ 0.95
PRPF38BQ5VTL8 AC090616.6-201ENST00000582640 721 ntBASIC20.98■□□□□ 0.95
PRPF38BQ5VTL8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.98■□□□□ 0.95
PRPF38BQ5VTL8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.98■□□□□ 0.95
PRPF38BQ5VTL8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF38BQ5VTL8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF38BQ5VTL8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPF38BQ5VTL8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.97■□□□□ 0.95
PRPF38BQ5VTL8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms