Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SNAPC4Q5SXM2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC31.74■■■□□ 2.67
SNAPC4Q5SXM2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SNAPC4Q5SXM2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
SNAPC4Q5SXM2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SNAPC4Q5SXM2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC31.72■■■□□ 2.67
SNAPC4Q5SXM2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC31.72■■■□□ 2.67
SNAPC4Q5SXM2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC31.72■■■□□ 2.67
SNAPC4Q5SXM2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
SNAPC4Q5SXM2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
SNAPC4Q5SXM2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SNAPC4Q5SXM2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SNAPC4Q5SXM2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SNAPC4Q5SXM2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC31.72■■■□□ 2.67
SNAPC4Q5SXM2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC31.72■■■□□ 2.67
SNAPC4Q5SXM2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC31.72■■■□□ 2.67
SNAPC4Q5SXM2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
SNAPC4Q5SXM2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
SNAPC4Q5SXM2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC31.71■■■□□ 2.67
SNAPC4Q5SXM2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC31.71■■■□□ 2.67
SNAPC4Q5SXM2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC31.71■■■□□ 2.67
SNAPC4Q5SXM2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
SNAPC4Q5SXM2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC31.71■■■□□ 2.67
SNAPC4Q5SXM2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
SNAPC4Q5SXM2 DRAXINP1-201ENST00000437611 948 ntBASIC31.71■■■□□ 2.67
SNAPC4Q5SXM2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC31.71■■■□□ 2.67
SNAPC4Q5SXM2 FBXW4P1-201ENST00000426721 2239 ntBASIC31.7■■■□□ 2.67
SNAPC4Q5SXM2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SNAPC4Q5SXM2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC31.7■■■□□ 2.66
SNAPC4Q5SXM2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
SNAPC4Q5SXM2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC31.7■■■□□ 2.66
SNAPC4Q5SXM2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC31.7■■■□□ 2.66
SNAPC4Q5SXM2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
SNAPC4Q5SXM2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SNAPC4Q5SXM2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SNAPC4Q5SXM2 EP400NL-214ENST00000641289 2402 ntBASIC31.69■■■□□ 2.66
SNAPC4Q5SXM2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC31.69■■■□□ 2.66
SNAPC4Q5SXM2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SNAPC4Q5SXM2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SNAPC4Q5SXM2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SNAPC4Q5SXM2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC31.69■■■□□ 2.66
SNAPC4Q5SXM2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
SNAPC4Q5SXM2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SNAPC4Q5SXM2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC31.68■■■□□ 2.66
SNAPC4Q5SXM2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
SNAPC4Q5SXM2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC31.68■■■□□ 2.66
SNAPC4Q5SXM2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
SNAPC4Q5SXM2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC31.68■■■□□ 2.66
SNAPC4Q5SXM2 PNN-202ENST00000553331 656 ntTSL 3 BASIC31.68■■■□□ 2.66
SNAPC4Q5SXM2 AC079602.3-201ENST00000623931 403 ntBASIC31.68■■■□□ 2.66
SNAPC4Q5SXM2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SNAPC4Q5SXM2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
SNAPC4Q5SXM2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SNAPC4Q5SXM2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
SNAPC4Q5SXM2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC31.68■■■□□ 2.66
SNAPC4Q5SXM2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC31.68■■■□□ 2.66
SNAPC4Q5SXM2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
SNAPC4Q5SXM2 KRT18P31-201ENST00000506277 1292 ntBASIC31.67■■■□□ 2.66
SNAPC4Q5SXM2 AC012615.1-201ENST00000565797 1299 ntBASIC31.67■■■□□ 2.66
SNAPC4Q5SXM2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC31.67■■■□□ 2.66
SNAPC4Q5SXM2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
SNAPC4Q5SXM2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SNAPC4Q5SXM2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SNAPC4Q5SXM2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC31.67■■■□□ 2.66
SNAPC4Q5SXM2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
SNAPC4Q5SXM2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SNAPC4Q5SXM2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SNAPC4Q5SXM2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SNAPC4Q5SXM2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC31.66■■■□□ 2.66
SNAPC4Q5SXM2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
SNAPC4Q5SXM2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC31.66■■■□□ 2.66
SNAPC4Q5SXM2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC31.66■■■□□ 2.66
SNAPC4Q5SXM2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SNAPC4Q5SXM2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC31.66■■■□□ 2.66
SNAPC4Q5SXM2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SNAPC4Q5SXM2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SNAPC4Q5SXM2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC31.66■■■□□ 2.66
SNAPC4Q5SXM2 HLA-A-201ENST00000376802 1334 ntBASIC31.66■■■□□ 2.66
SNAPC4Q5SXM2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SNAPC4Q5SXM2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SNAPC4Q5SXM2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SNAPC4Q5SXM2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC31.66■■■□□ 2.66
SNAPC4Q5SXM2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms