Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.91■□□□□ 0.78
ALFQ53S48 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ALFQ53S48 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.91■□□□□ 0.78
ALFQ53S48 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.91■□□□□ 0.78
ALFQ53S48 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ALFQ53S48 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ALFQ53S48 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALFQ53S48 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
ALFQ53S48 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALFQ53S48 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
ALFQ53S48 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.9■□□□□ 0.78
ALFQ53S48 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALFQ53S48 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.9■□□□□ 0.78
ALFQ53S48 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ALFQ53S48 SLC25A24-204ENST00000569674 2357 ntBASIC19.9■□□□□ 0.78
ALFQ53S48 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALFQ53S48 AL355355.2-201ENST00000442321 338 ntBASIC19.9■□□□□ 0.78
ALFQ53S48 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALFQ53S48 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALFQ53S48 AP003071.4-201ENST00000562276 1284 ntBASIC19.9■□□□□ 0.78
ALFQ53S48 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.9■□□□□ 0.78
ALFQ53S48 AL160286.2-201ENST00000567150 934 ntBASIC19.9■□□□□ 0.78
ALFQ53S48 AC131212.4-201ENST00000623606 975 ntBASIC19.9■□□□□ 0.78
ALFQ53S48 AL031985.4-201ENST00000642138 673 ntBASIC19.9■□□□□ 0.78
ALFQ53S48 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALFQ53S48 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ALFQ53S48 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ALFQ53S48 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALFQ53S48 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ALFQ53S48 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALFQ53S48 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ALFQ53S48 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
ALFQ53S48 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
ALFQ53S48 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.89■□□□□ 0.77
ALFQ53S48 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.89■□□□□ 0.77
ALFQ53S48 MESTP1-201ENST00000404287 994 ntBASIC19.89■□□□□ 0.77
ALFQ53S48 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALFQ53S48 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ALFQ53S48 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALFQ53S48 AC011506.1-201ENST00000474329 610 ntBASIC19.89■□□□□ 0.77
ALFQ53S48 Z85996.1-201ENST00000494644 937 ntBASIC19.89■□□□□ 0.77
ALFQ53S48 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ALFQ53S48 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.89■□□□□ 0.77
ALFQ53S48 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALFQ53S48 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.89■□□□□ 0.77
ALFQ53S48 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.89■□□□□ 0.77
ALFQ53S48 REXO1L10P-201ENST00000615707 1290 ntBASIC19.89■□□□□ 0.77
ALFQ53S48 REXO1L12P-201ENST00000622156 912 ntBASIC19.89■□□□□ 0.77
ALFQ53S48 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ALFQ53S48 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALFQ53S48 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ALFQ53S48 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALFQ53S48 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.88■□□□□ 0.77
ALFQ53S48 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ALFQ53S48 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALFQ53S48 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALFQ53S48 KRT17P2-201ENST00000300992 1314 ntBASIC19.88■□□□□ 0.77
ALFQ53S48 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ALFQ53S48 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.88■□□□□ 0.77
ALFQ53S48 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ALFQ53S48 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.88■□□□□ 0.77
ALFQ53S48 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.88■□□□□ 0.77
ALFQ53S48 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.88■□□□□ 0.77
ALFQ53S48 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.88■□□□□ 0.77
ALFQ53S48 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.88■□□□□ 0.77
ALFQ53S48 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.88■□□□□ 0.77
ALFQ53S48 AL355075.4-201ENST00000554988 638 ntBASIC19.88■□□□□ 0.77
ALFQ53S48 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALFQ53S48 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.88■□□□□ 0.77
ALFQ53S48 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ALFQ53S48 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ALFQ53S48 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.87■□□□□ 0.77
ALFQ53S48 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALFQ53S48 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
ALFQ53S48 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.87■□□□□ 0.77
ALFQ53S48 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.87■□□□□ 0.77
ALFQ53S48 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.87■□□□□ 0.77
ALFQ53S48 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ALFQ53S48 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ALFQ53S48 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALFQ53S48 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.87■□□□□ 0.77
ALFQ53S48 SDHAP1-207ENST00000440850 2000 ntBASIC19.87■□□□□ 0.77
ALFQ53S48 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALFQ53S48 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
ALFQ53S48 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALFQ53S48 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.87■□□□□ 0.77
ALFQ53S48 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALFQ53S48 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ALFQ53S48 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ALFQ53S48 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.87■□□□□ 0.77
ALFQ53S48 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.87■□□□□ 0.77
ALFQ53S48 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.87■□□□□ 0.77
ALFQ53S48 AC116562.2-201ENST00000507042 360 ntBASIC19.87■□□□□ 0.77
ALFQ53S48 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.87■□□□□ 0.77
ALFQ53S48 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.87■□□□□ 0.77
ALFQ53S48 AC026271.3-201ENST00000571884 352 ntBASIC19.87■□□□□ 0.77
ALFQ53S48 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.87■□□□□ 0.77
ALFQ53S48 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ALFQ53S48 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.87■□□□□ 0.77
ALFQ53S48 Z82202.1-201ENST00000623446 1880 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms