Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SHROOM1Q2M3G4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
SHROOM1Q2M3G4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.61■■□□□ 1.21
SHROOM1Q2M3G4 AC010653.2-201ENST00000623505 997 ntBASIC22.61■■□□□ 1.21
SHROOM1Q2M3G4 AC141257.4-201ENST00000634557 245 ntBASIC22.61■■□□□ 1.21
SHROOM1Q2M3G4 AC136944.6-201ENST00000634818 245 ntBASIC22.61■■□□□ 1.21
SHROOM1Q2M3G4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHROOM1Q2M3G4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
SHROOM1Q2M3G4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SHROOM1Q2M3G4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.61■■□□□ 1.21
SHROOM1Q2M3G4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 KRT8P45-201ENST00000414328 1447 ntBASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 AL023973.1-201ENST00000624619 620 ntBASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.6■■□□□ 1.21
SHROOM1Q2M3G4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 AC104417.2-201ENST00000562989 1793 ntBASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 AL358472.4-201ENST00000633140 710 ntBASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
SHROOM1Q2M3G4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 AL031133.1-201ENST00000406807 723 ntBASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 AL441883.1-201ENST00000566170 1045 ntBASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.58■■□□□ 1.21
SHROOM1Q2M3G4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SHROOM1Q2M3G4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
SHROOM1Q2M3G4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.58■■□□□ 1.2
SHROOM1Q2M3G4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
SHROOM1Q2M3G4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 RNF152P1-201ENST00000397754 604 ntBASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 FAM8A6P-201ENST00000407496 1135 ntBASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 TSPY17P-201ENST00000450329 467 ntBASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 SDHAP1-207ENST00000440850 2000 ntBASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 TBC1D3P2-202ENST00000577902 1649 ntBASIC22.57■■□□□ 1.2
SHROOM1Q2M3G4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SHROOM1Q2M3G4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SHROOM1Q2M3G4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.56■■□□□ 1.2
SHROOM1Q2M3G4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms