Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-1P78426 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-1P78426 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-1P78426 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.01■□□□□ 0.31
NKX6-1P78426 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.01■□□□□ 0.31
NKX6-1P78426 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.01■□□□□ 0.31
NKX6-1P78426 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-1P78426 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.01■□□□□ 0.31
NKX6-1P78426 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.01■□□□□ 0.31
NKX6-1P78426 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.01■□□□□ 0.31
NKX6-1P78426 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NKX6-1P78426 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.01■□□□□ 0.31
NKX6-1P78426 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-1P78426 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.01■□□□□ 0.31
NKX6-1P78426 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-1P78426 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-1P78426 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-1P78426 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.01■□□□□ 0.31
NKX6-1P78426 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-1P78426 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.01■□□□□ 0.31
NKX6-1P78426 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.01■□□□□ 0.31
NKX6-1P78426 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-1P78426 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17■□□□□ 0.31
NKX6-1P78426 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-1P78426 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-1P78426 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17■□□□□ 0.31
NKX6-1P78426 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-1P78426 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-1P78426 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
NKX6-1P78426 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17■□□□□ 0.31
NKX6-1P78426 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17■□□□□ 0.31
NKX6-1P78426 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-1P78426 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17■□□□□ 0.31
NKX6-1P78426 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NKX6-1P78426 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17■□□□□ 0.31
NKX6-1P78426 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-1P78426 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NKX6-1P78426 MIR1238-201ENST00000408483 83 ntBASIC17■□□□□ 0.31
NKX6-1P78426 AC113347.1-201ENST00000413321 391 ntBASIC17■□□□□ 0.31
NKX6-1P78426 AL137013.1-201ENST00000432946 1228 ntBASIC17■□□□□ 0.31
NKX6-1P78426 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17■□□□□ 0.31
NKX6-1P78426 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-1P78426 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17■□□□□ 0.31
NKX6-1P78426 NUDT16P1-203ENST00000513809 620 ntBASIC17■□□□□ 0.31
NKX6-1P78426 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17■□□□□ 0.31
NKX6-1P78426 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17■□□□□ 0.31
NKX6-1P78426 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17■□□□□ 0.31
NKX6-1P78426 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NKX6-1P78426 AP000525.1-201ENST00000608286 694 ntBASIC17■□□□□ 0.31
NKX6-1P78426 AC004264.1-201ENST00000608354 794 ntBASIC17■□□□□ 0.31
NKX6-1P78426 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17■□□□□ 0.31
NKX6-1P78426 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-1P78426 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
NKX6-1P78426 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17■□□□□ 0.31
NKX6-1P78426 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NKX6-1P78426 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.99■□□□□ 0.31
NKX6-1P78426 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX6-1P78426 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
NKX6-1P78426 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NKX6-1P78426 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX6-1P78426 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NKX6-1P78426 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.99■□□□□ 0.31
NKX6-1P78426 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.99■□□□□ 0.31
NKX6-1P78426 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.99■□□□□ 0.31
NKX6-1P78426 KRT18P57-201ENST00000443599 1254 ntBASIC16.99■□□□□ 0.31
NKX6-1P78426 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NKX6-1P78426 AP002982.1-201ENST00000492365 877 ntBASIC16.99■□□□□ 0.31
NKX6-1P78426 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.99■□□□□ 0.31
NKX6-1P78426 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.99■□□□□ 0.31
NKX6-1P78426 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.99■□□□□ 0.31
NKX6-1P78426 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.99■□□□□ 0.31
NKX6-1P78426 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.99■□□□□ 0.31
NKX6-1P78426 NAPSB-206ENST00000562112 1266 ntBASIC16.99■□□□□ 0.31
NKX6-1P78426 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.99■□□□□ 0.31
NKX6-1P78426 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.99■□□□□ 0.31
NKX6-1P78426 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.99■□□□□ 0.31
NKX6-1P78426 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX6-1P78426 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.99■□□□□ 0.31
NKX6-1P78426 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
NKX6-1P78426 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
NKX6-1P78426 LINC01006-201ENST00000333319 2292 ntBASIC16.99■□□□□ 0.31
NKX6-1P78426 AC079598.2-202ENST00000546624 1451 ntBASIC16.99■□□□□ 0.31
NKX6-1P78426 KRT18P22-201ENST00000402024 1347 ntBASIC16.98■□□□□ 0.31
NKX6-1P78426 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX6-1P78426 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX6-1P78426 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX6-1P78426 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.98■□□□□ 0.31
NKX6-1P78426 KRT8P9-201ENST00000558927 1449 ntBASIC16.98■□□□□ 0.31
NKX6-1P78426 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX6-1P78426 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
NKX6-1P78426 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX6-1P78426 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX6-1P78426 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX6-1P78426 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX6-1P78426 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX6-1P78426 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.98■□□□□ 0.31
NKX6-1P78426 REXO1L10P-201ENST00000615707 1290 ntBASIC16.98■□□□□ 0.31
NKX6-1P78426 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.98■□□□□ 0.31
NKX6-1P78426 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX6-1P78426 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms