Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRA2BP62995 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.27■□□□□ 0.52
TRA2BP62995 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRA2BP62995 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRA2BP62995 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TRA2BP62995 AC128676.1-201ENST00000454392 318 ntBASIC18.27■□□□□ 0.52
TRA2BP62995 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRA2BP62995 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRA2BP62995 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.27■□□□□ 0.52
TRA2BP62995 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRA2BP62995 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.27■□□□□ 0.52
TRA2BP62995 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
TRA2BP62995 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRA2BP62995 HLA-A-209ENST00000638375 975 ntBASIC18.27■□□□□ 0.52
TRA2BP62995 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRA2BP62995 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRA2BP62995 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRA2BP62995 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
TRA2BP62995 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.27■□□□□ 0.51
TRA2BP62995 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.27■□□□□ 0.51
TRA2BP62995 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRA2BP62995 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.26■□□□□ 0.51
TRA2BP62995 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRA2BP62995 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRA2BP62995 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRA2BP62995 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRA2BP62995 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRA2BP62995 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.26■□□□□ 0.51
TRA2BP62995 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRA2BP62995 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRA2BP62995 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.26■□□□□ 0.51
TRA2BP62995 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRA2BP62995 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRA2BP62995 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRA2BP62995 AL160286.2-201ENST00000567150 934 ntBASIC18.26■□□□□ 0.51
TRA2BP62995 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.26■□□□□ 0.51
TRA2BP62995 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRA2BP62995 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRA2BP62995 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.26■□□□□ 0.51
TRA2BP62995 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
TRA2BP62995 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRA2BP62995 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRA2BP62995 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRA2BP62995 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRA2BP62995 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRA2BP62995 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRA2BP62995 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.25■□□□□ 0.51
TRA2BP62995 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
TRA2BP62995 MIR4651-201ENST00000582622 73 ntBASIC18.25■□□□□ 0.51
TRA2BP62995 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.25■□□□□ 0.51
TRA2BP62995 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRA2BP62995 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.25■□□□□ 0.51
TRA2BP62995 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.25■□□□□ 0.51
TRA2BP62995 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRA2BP62995 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRA2BP62995 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRA2BP62995 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRA2BP62995 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRA2BP62995 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRA2BP62995 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.25■□□□□ 0.51
TRA2BP62995 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.25■□□□□ 0.51
TRA2BP62995 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.24■□□□□ 0.51
TRA2BP62995 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.24■□□□□ 0.51
TRA2BP62995 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRA2BP62995 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRA2BP62995 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.24■□□□□ 0.51
TRA2BP62995 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRA2BP62995 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRA2BP62995 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRA2BP62995 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRA2BP62995 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TRA2BP62995 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.24■□□□□ 0.51
TRA2BP62995 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.24■□□□□ 0.51
TRA2BP62995 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRA2BP62995 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRA2BP62995 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRA2BP62995 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.24■□□□□ 0.51
TRA2BP62995 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.24■□□□□ 0.51
TRA2BP62995 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRA2BP62995 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.24■□□□□ 0.51
TRA2BP62995 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRA2BP62995 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.24■□□□□ 0.51
TRA2BP62995 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.23■□□□□ 0.51
TRA2BP62995 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRA2BP62995 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRA2BP62995 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRA2BP62995 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRA2BP62995 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRA2BP62995 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRA2BP62995 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRA2BP62995 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.23■□□□□ 0.51
TRA2BP62995 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
TRA2BP62995 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRA2BP62995 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRA2BP62995 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRA2BP62995 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRA2BP62995 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.23■□□□□ 0.51
TRA2BP62995 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRA2BP62995 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.23■□□□□ 0.51
TRA2BP62995 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms