Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4XP62701 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.47■□□□□ 0.39
RPS4XP62701 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RPS4XP62701 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.47■□□□□ 0.39
RPS4XP62701 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RPS4XP62701 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4XP62701 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RPS4XP62701 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS4XP62701 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.47■□□□□ 0.39
RPS4XP62701 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RPS4XP62701 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.47■□□□□ 0.39
RPS4XP62701 AC069544.1-201ENST00000609399 999 ntBASIC17.47■□□□□ 0.39
RPS4XP62701 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS4XP62701 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4XP62701 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4XP62701 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.47■□□□□ 0.39
RPS4XP62701 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RPS4XP62701 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4XP62701 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4XP62701 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4XP62701 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4XP62701 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4XP62701 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4XP62701 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.47■□□□□ 0.39
RPS4XP62701 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4XP62701 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPS4XP62701 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4XP62701 AC104417.2-201ENST00000562989 1793 ntBASIC17.46■□□□□ 0.39
RPS4XP62701 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4XP62701 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4XP62701 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4XP62701 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4XP62701 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.46■□□□□ 0.39
RPS4XP62701 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.46■□□□□ 0.39
RPS4XP62701 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4XP62701 KRT18P16-201ENST00000510337 1294 ntBASIC17.46■□□□□ 0.39
RPS4XP62701 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.46■□□□□ 0.39
RPS4XP62701 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4XP62701 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4XP62701 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RPS4XP62701 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4XP62701 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPS4XP62701 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
RPS4XP62701 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.46■□□□□ 0.38
RPS4XP62701 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.46■□□□□ 0.38
RPS4XP62701 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RPS4XP62701 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RPS4XP62701 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4XP62701 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.45■□□□□ 0.38
RPS4XP62701 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RPS4XP62701 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RPS4XP62701 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
RPS4XP62701 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.45■□□□□ 0.38
RPS4XP62701 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4XP62701 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4XP62701 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.45■□□□□ 0.38
RPS4XP62701 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.45■□□□□ 0.38
RPS4XP62701 AL161938.1-201ENST00000569833 2180 ntBASIC17.45■□□□□ 0.38
RPS4XP62701 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4XP62701 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.45■□□□□ 0.38
RPS4XP62701 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RPS4XP62701 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4XP62701 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.45■□□□□ 0.38
RPS4XP62701 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4XP62701 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
RPS4XP62701 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.45■□□□□ 0.38
RPS4XP62701 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.45■□□□□ 0.38
RPS4XP62701 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.45■□□□□ 0.38
RPS4XP62701 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.45■□□□□ 0.38
RPS4XP62701 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4XP62701 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4XP62701 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.45■□□□□ 0.38
RPS4XP62701 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4XP62701 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4XP62701 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RPS4XP62701 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4XP62701 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4XP62701 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPS4XP62701 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.44■□□□□ 0.38
RPS4XP62701 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.44■□□□□ 0.38
RPS4XP62701 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.44■□□□□ 0.38
RPS4XP62701 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RPS4XP62701 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.44■□□□□ 0.38
RPS4XP62701 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RPS4XP62701 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 POM121L13P-201ENST00000422362 380 ntBASIC17.44■□□□□ 0.38
RPS4XP62701 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RPS4XP62701 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.44■□□□□ 0.38
RPS4XP62701 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.44■□□□□ 0.38
RPS4XP62701 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms