Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAB11AP62491 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB11AP62491 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RAB11AP62491 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB11AP62491 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB11AP62491 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB11AP62491 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB11AP62491 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.71■□□□□ 0.11
RAB11AP62491 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB11AP62491 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.71■□□□□ 0.1
RAB11AP62491 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB11AP62491 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
RAB11AP62491 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB11AP62491 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.71■□□□□ 0.1
RAB11AP62491 AC079598.2-202ENST00000546624 1451 ntBASIC15.71■□□□□ 0.1
RAB11AP62491 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB11AP62491 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
RAB11AP62491 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB11AP62491 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RAB11AP62491 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB11AP62491 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB11AP62491 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB11AP62491 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB11AP62491 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB11AP62491 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB11AP62491 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB11AP62491 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB11AP62491 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB11AP62491 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB11AP62491 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.7■□□□□ 0.1
RAB11AP62491 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB11AP62491 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB11AP62491 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB11AP62491 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB11AP62491 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
RAB11AP62491 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB11AP62491 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB11AP62491 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB11AP62491 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB11AP62491 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB11AP62491 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RAB11AP62491 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB11AP62491 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RAB11AP62491 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RAB11AP62491 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB11AP62491 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB11AP62491 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB11AP62491 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAB11AP62491 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAB11AP62491 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB11AP62491 PCDHB18P-201ENST00000524813 2368 ntBASIC15.69■□□□□ 0.1
RAB11AP62491 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB11AP62491 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RAB11AP62491 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB11AP62491 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB11AP62491 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB11AP62491 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB11AP62491 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB11AP62491 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB11AP62491 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB11AP62491 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB11AP62491 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAB11AP62491 MCRIP2P1-201ENST00000394346 511 ntBASIC15.69■□□□□ 0.1
RAB11AP62491 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB11AP62491 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.69■□□□□ 0.1
RAB11AP62491 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAB11AP62491 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB11AP62491 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RAB11AP62491 AC010536.3-201ENST00000620306 533 ntBASIC15.69■□□□□ 0.1
RAB11AP62491 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAB11AP62491 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB11AP62491 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB11AP62491 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB11AP62491 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB11AP62491 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB11AP62491 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
RAB11AP62491 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB11AP62491 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB11AP62491 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB11AP62491 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB11AP62491 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB11AP62491 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB11AP62491 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB11AP62491 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB11AP62491 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB11AP62491 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB11AP62491 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB11AP62491 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB11AP62491 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB11AP62491 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB11AP62491 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB11AP62491 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB11AP62491 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
RAB11AP62491 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB11AP62491 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB11AP62491 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB11AP62491 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB11AP62491 MFSD11-216ENST00000590393 1141 ntBASIC15.68■□□□□ 0.1
RAB11AP62491 AC100791.3-201ENST00000617619 330 ntBASIC15.68■□□□□ 0.1
RAB11AP62491 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms