Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH8P55286 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH8P55286 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH8P55286 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDH8P55286 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH8P55286 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH8P55286 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH8P55286 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH8P55286 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.67■□□□□ 0.9
CDH8P55286 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.67■□□□□ 0.9
CDH8P55286 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.67■□□□□ 0.9
CDH8P55286 AC026471.5-201ENST00000615068 467 ntBASIC20.67■□□□□ 0.9
CDH8P55286 AC131212.4-201ENST00000623606 975 ntBASIC20.67■□□□□ 0.9
CDH8P55286 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH8P55286 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH8P55286 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH8P55286 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH8P55286 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH8P55286 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CDH8P55286 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH8P55286 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH8P55286 AC093484.2-201ENST00000580996 2166 ntBASIC20.66■□□□□ 0.9
CDH8P55286 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CDH8P55286 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH8P55286 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CDH8P55286 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH8P55286 TSPY15P-201ENST00000457163 923 ntBASIC20.66■□□□□ 0.9
CDH8P55286 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH8P55286 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.66■□□□□ 0.9
CDH8P55286 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH8P55286 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
CDH8P55286 AL031985.4-201ENST00000642138 673 ntBASIC20.66■□□□□ 0.9
CDH8P55286 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH8P55286 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CDH8P55286 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH8P55286 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.66■□□□□ 0.9
CDH8P55286 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.66■□□□□ 0.9
CDH8P55286 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH8P55286 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH8P55286 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH8P55286 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH8P55286 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.66■□□□□ 0.9
CDH8P55286 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH8P55286 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH8P55286 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH8P55286 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.65■□□□□ 0.9
CDH8P55286 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDH8P55286 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH8P55286 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.65■□□□□ 0.9
CDH8P55286 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH8P55286 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.65■□□□□ 0.9
CDH8P55286 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CDH8P55286 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CDH8P55286 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH8P55286 AL355355.2-201ENST00000442321 338 ntBASIC20.65■□□□□ 0.9
CDH8P55286 AC011506.1-201ENST00000474329 610 ntBASIC20.65■□□□□ 0.9
CDH8P55286 Z85996.1-201ENST00000494644 937 ntBASIC20.65■□□□□ 0.9
CDH8P55286 NUDT16P1-203ENST00000513809 620 ntBASIC20.65■□□□□ 0.9
CDH8P55286 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.65■□□□□ 0.9
CDH8P55286 AP003071.4-201ENST00000562276 1284 ntBASIC20.65■□□□□ 0.9
CDH8P55286 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH8P55286 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH8P55286 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH8P55286 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.65■□□□□ 0.9
CDH8P55286 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDH8P55286 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH8P55286 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDH8P55286 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH8P55286 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH8P55286 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CDH8P55286 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDH8P55286 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDH8P55286 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CDH8P55286 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
CDH8P55286 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CDH8P55286 MESTP1-201ENST00000404287 994 ntBASIC20.64■□□□□ 0.89
CDH8P55286 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH8P55286 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.64■□□□□ 0.89
CDH8P55286 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.64■□□□□ 0.89
CDH8P55286 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.64■□□□□ 0.89
CDH8P55286 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDH8P55286 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDH8P55286 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH8P55286 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CDH8P55286 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.64■□□□□ 0.89
CDH8P55286 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CDH8P55286 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CDH8P55286 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
CDH8P55286 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.63■□□□□ 0.89
CDH8P55286 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.63■□□□□ 0.89
CDH8P55286 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDH8P55286 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH8P55286 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH8P55286 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDH8P55286 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDH8P55286 AC008040.2-201ENST00000461049 708 ntBASIC20.63■□□□□ 0.89
CDH8P55286 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH8P55286 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.63■□□□□ 0.89
CDH8P55286 REXO1L10P-201ENST00000615707 1290 ntBASIC20.63■□□□□ 0.89
CDH8P55286 REXO1L12P-201ENST00000622156 912 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms