Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
NCKAP1LP55160 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCKAP1LP55160 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.22■□□□□ 0.99
NCKAP1LP55160 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCKAP1LP55160 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.22■□□□□ 0.99
NCKAP1LP55160 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCKAP1LP55160 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCKAP1LP55160 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCKAP1LP55160 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCKAP1LP55160 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
NCKAP1LP55160 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
NCKAP1LP55160 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NCKAP1LP55160 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NCKAP1LP55160 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.21■□□□□ 0.99
NCKAP1LP55160 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCKAP1LP55160 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NCKAP1LP55160 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.21■□□□□ 0.99
NCKAP1LP55160 B3GAT3P1-201ENST00000471720 806 ntBASIC21.21■□□□□ 0.99
NCKAP1LP55160 AC011506.1-201ENST00000474329 610 ntBASIC21.21■□□□□ 0.99
NCKAP1LP55160 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.21■□□□□ 0.99
NCKAP1LP55160 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.21■□□□□ 0.99
NCKAP1LP55160 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NCKAP1LP55160 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.21■□□□□ 0.99
NCKAP1LP55160 MIR4785-201ENST00000585005 73 ntBASIC21.21■□□□□ 0.99
NCKAP1LP55160 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.21■□□□□ 0.99
NCKAP1LP55160 MIR6786-201ENST00000616843 113 ntBASIC21.21■□□□□ 0.99
NCKAP1LP55160 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCKAP1LP55160 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.21■□□□□ 0.99
NCKAP1LP55160 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NCKAP1LP55160 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
NCKAP1LP55160 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
NCKAP1LP55160 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.21■□□□□ 0.99
NCKAP1LP55160 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NCKAP1LP55160 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCKAP1LP55160 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCKAP1LP55160 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCKAP1LP55160 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NCKAP1LP55160 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCKAP1LP55160 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
NCKAP1LP55160 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NCKAP1LP55160 AL355355.2-201ENST00000442321 338 ntBASIC21.2■□□□□ 0.98
NCKAP1LP55160 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.2■□□□□ 0.98
NCKAP1LP55160 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.2■□□□□ 0.98
NCKAP1LP55160 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.2■□□□□ 0.98
NCKAP1LP55160 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.2■□□□□ 0.98
NCKAP1LP55160 REXO1L10P-201ENST00000615707 1290 ntBASIC21.2■□□□□ 0.98
NCKAP1LP55160 REXO1L12P-201ENST00000622156 912 ntBASIC21.2■□□□□ 0.98
NCKAP1LP55160 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.2■□□□□ 0.98
NCKAP1LP55160 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
NCKAP1LP55160 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NCKAP1LP55160 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
NCKAP1LP55160 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.2■□□□□ 0.98
NCKAP1LP55160 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.2■□□□□ 0.98
NCKAP1LP55160 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.19■□□□□ 0.98
NCKAP1LP55160 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCKAP1LP55160 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.19■□□□□ 0.98
NCKAP1LP55160 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCKAP1LP55160 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCKAP1LP55160 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NCKAP1LP55160 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.19■□□□□ 0.98
NCKAP1LP55160 AP003071.4-201ENST00000562276 1284 ntBASIC21.19■□□□□ 0.98
NCKAP1LP55160 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.19■□□□□ 0.98
NCKAP1LP55160 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCKAP1LP55160 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCKAP1LP55160 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCKAP1LP55160 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NCKAP1LP55160 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCKAP1LP55160 FSCN1P1-201ENST00000568912 1481 ntBASIC21.19■□□□□ 0.98
NCKAP1LP55160 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NCKAP1LP55160 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCKAP1LP55160 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.18■□□□□ 0.98
NCKAP1LP55160 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCKAP1LP55160 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
NCKAP1LP55160 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCKAP1LP55160 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCKAP1LP55160 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCKAP1LP55160 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCKAP1LP55160 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.18■□□□□ 0.98
NCKAP1LP55160 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.18■□□□□ 0.98
NCKAP1LP55160 AC004951.3-201ENST00000418645 1148 ntBASIC21.18■□□□□ 0.98
NCKAP1LP55160 AC008040.2-201ENST00000461049 708 ntBASIC21.18■□□□□ 0.98
NCKAP1LP55160 AC091390.4-202ENST00000476426 537 ntBASIC21.18■□□□□ 0.98
NCKAP1LP55160 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.18■□□□□ 0.98
NCKAP1LP55160 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCKAP1LP55160 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.18■□□□□ 0.98
NCKAP1LP55160 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.18■□□□□ 0.98
NCKAP1LP55160 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.18■□□□□ 0.98
NCKAP1LP55160 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCKAP1LP55160 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NCKAP1LP55160 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NCKAP1LP55160 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.18■□□□□ 0.98
NCKAP1LP55160 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.17■□□□□ 0.98
NCKAP1LP55160 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCKAP1LP55160 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCKAP1LP55160 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCKAP1LP55160 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NCKAP1LP55160 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCKAP1LP55160 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.17■□□□□ 0.98
NCKAP1LP55160 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCKAP1LP55160 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms