Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.97■■□□□ 1.11
LBX1P52954 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.97■■□□□ 1.11
LBX1P52954 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LBX1P52954 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LBX1P52954 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LBX1P52954 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LBX1P52954 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LBX1P52954 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
LBX1P52954 KRT8P41-201ENST00000533985 1514 ntBASIC21.96■■□□□ 1.11
LBX1P52954 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LBX1P52954 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.96■■□□□ 1.11
LBX1P52954 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.96■■□□□ 1.11
LBX1P52954 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LBX1P52954 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.96■■□□□ 1.11
LBX1P52954 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
LBX1P52954 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LBX1P52954 LINC01465-201ENST00000408887 1940 ntBASIC21.96■■□□□ 1.11
LBX1P52954 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
LBX1P52954 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LBX1P52954 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LBX1P52954 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
LBX1P52954 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
LBX1P52954 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.95■■□□□ 1.1
LBX1P52954 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LBX1P52954 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.95■■□□□ 1.1
LBX1P52954 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LBX1P52954 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
LBX1P52954 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LBX1P52954 IGHV3-47-201ENST00000425060 335 ntBASIC21.95■■□□□ 1.1
LBX1P52954 FAM8A3P-201ENST00000427218 844 ntBASIC21.95■■□□□ 1.1
LBX1P52954 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.95■■□□□ 1.1
LBX1P52954 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21.95■■□□□ 1.1
LBX1P52954 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.95■■□□□ 1.1
LBX1P52954 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LBX1P52954 IGHV3-41-201ENST00000613121 348 ntBASIC21.95■■□□□ 1.1
LBX1P52954 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.95■■□□□ 1.1
LBX1P52954 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
LBX1P52954 AC134684.3-201ENST00000641758 218 ntBASIC21.95■■□□□ 1.1
LBX1P52954 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.95■■□□□ 1.1
LBX1P52954 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.95■■□□□ 1.1
LBX1P52954 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LBX1P52954 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LBX1P52954 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LBX1P52954 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LBX1P52954 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.95■■□□□ 1.1
LBX1P52954 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LBX1P52954 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LBX1P52954 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.94■■□□□ 1.1
LBX1P52954 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LBX1P52954 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.94■■□□□ 1.1
LBX1P52954 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LBX1P52954 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LBX1P52954 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LBX1P52954 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LBX1P52954 NUS1P2-201ENST00000417358 873 ntBASIC21.94■■□□□ 1.1
LBX1P52954 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LBX1P52954 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.94■■□□□ 1.1
LBX1P52954 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LBX1P52954 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.94■■□□□ 1.1
LBX1P52954 MIR3687-2-201ENST00000577708 61 ntBASIC21.94■■□□□ 1.1
LBX1P52954 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.94■■□□□ 1.1
LBX1P52954 AC090616.6-201ENST00000582640 721 ntBASIC21.94■■□□□ 1.1
LBX1P52954 AL136038.4-201ENST00000603606 1261 ntBASIC21.94■■□□□ 1.1
LBX1P52954 MIR7706-201ENST00000613747 67 ntBASIC21.94■■□□□ 1.1
LBX1P52954 MIR3687-1-201ENST00000614492 61 ntBASIC21.94■■□□□ 1.1
LBX1P52954 KRT16P6-202ENST00000425692 1426 ntBASIC21.94■■□□□ 1.1
LBX1P52954 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.94■■□□□ 1.1
LBX1P52954 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LBX1P52954 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.94■■□□□ 1.1
LBX1P52954 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LBX1P52954 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LBX1P52954 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LBX1P52954 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LBX1P52954 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LBX1P52954 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.93■■□□□ 1.1
LBX1P52954 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LBX1P52954 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.93■■□□□ 1.1
LBX1P52954 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LBX1P52954 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.93■■□□□ 1.1
LBX1P52954 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.93■■□□□ 1.1
LBX1P52954 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.93■■□□□ 1.1
LBX1P52954 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC21.93■■□□□ 1.1
LBX1P52954 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LBX1P52954 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LBX1P52954 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.93■■□□□ 1.1
LBX1P52954 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.92■■□□□ 1.1
LBX1P52954 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.92■■□□□ 1.1
LBX1P52954 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.92■■□□□ 1.1
LBX1P52954 TMEM179-206ENST00000616017 1645 ntBASIC21.92■■□□□ 1.1
LBX1P52954 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
LBX1P52954 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.92■■□□□ 1.1
LBX1P52954 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LBX1P52954 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.92■■□□□ 1.1
LBX1P52954 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LBX1P52954 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LBX1P52954 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
LBX1P52954 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LBX1P52954 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LBX1P52954 Z83836.1-201ENST00000624605 1642 ntBASIC21.91■■□□□ 1.1
LBX1P52954 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms