Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPAP49450 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CENPAP49450 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.51■□□□□ 0.39
CENPAP49450 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPAP49450 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPAP49450 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPAP49450 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPAP49450 CROCCP5-201ENST00000436658 830 ntBASIC17.51■□□□□ 0.39
CENPAP49450 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CENPAP49450 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.51■□□□□ 0.39
CENPAP49450 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.51■□□□□ 0.39
CENPAP49450 AC083906.2-201ENST00000511578 360 ntBASIC17.51■□□□□ 0.39
CENPAP49450 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.51■□□□□ 0.39
CENPAP49450 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.51■□□□□ 0.39
CENPAP49450 AL121832.2-201ENST00000610979 668 ntBASIC17.51■□□□□ 0.39
CENPAP49450 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.51■□□□□ 0.39
CENPAP49450 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CENPAP49450 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CENPAP49450 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPAP49450 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CENPAP49450 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.51■□□□□ 0.39
CENPAP49450 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPAP49450 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPAP49450 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPAP49450 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPAP49450 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CENPAP49450 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CENPAP49450 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CENPAP49450 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CENPAP49450 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CENPAP49450 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CENPAP49450 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CENPAP49450 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CENPAP49450 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CENPAP49450 SLC29A4P1-201ENST00000398760 971 ntBASIC17.5■□□□□ 0.39
CENPAP49450 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.5■□□□□ 0.39
CENPAP49450 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.5■□□□□ 0.39
CENPAP49450 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.5■□□□□ 0.39
CENPAP49450 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.5■□□□□ 0.39
CENPAP49450 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CENPAP49450 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CENPAP49450 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CENPAP49450 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CENPAP49450 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CENPAP49450 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CENPAP49450 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.49■□□□□ 0.39
CENPAP49450 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPAP49450 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.49■□□□□ 0.39
CENPAP49450 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.49■□□□□ 0.39
CENPAP49450 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CENPAP49450 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPAP49450 AC026471.1-201ENST00000564629 3026 ntBASIC17.49■□□□□ 0.39
CENPAP49450 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPAP49450 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPAP49450 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CENPAP49450 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.49■□□□□ 0.39
CENPAP49450 MIPEPP3-201ENST00000412105 444 ntBASIC17.49■□□□□ 0.39
CENPAP49450 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.49■□□□□ 0.39
CENPAP49450 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CENPAP49450 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
CENPAP49450 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CENPAP49450 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.49■□□□□ 0.39
CENPAP49450 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.49■□□□□ 0.39
CENPAP49450 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPAP49450 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.49■□□□□ 0.39
CENPAP49450 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CENPAP49450 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CENPAP49450 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPAP49450 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPAP49450 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPAP49450 AC018553.1-201ENST00000616682 1458 ntBASIC17.49■□□□□ 0.39
CENPAP49450 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPAP49450 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPAP49450 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPAP49450 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.49■□□□□ 0.39
CENPAP49450 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CENPAP49450 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.48■□□□□ 0.39
CENPAP49450 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CENPAP49450 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CENPAP49450 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPAP49450 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPAP49450 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.48■□□□□ 0.39
CENPAP49450 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPAP49450 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.48■□□□□ 0.39
CENPAP49450 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPAP49450 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPAP49450 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPAP49450 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPAP49450 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CENPAP49450 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.48■□□□□ 0.39
CENPAP49450 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.48■□□□□ 0.39
CENPAP49450 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.48■□□□□ 0.39
CENPAP49450 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CENPAP49450 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPAP49450 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CENPAP49450 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPAP49450 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPAP49450 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CENPAP49450 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.48■□□□□ 0.39
CENPAP49450 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms