Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP13P45452 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
MMP13P45452 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.1■□□□□ 0.81
MMP13P45452 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP13P45452 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP13P45452 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP13P45452 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP13P45452 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
MMP13P45452 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP13P45452 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP13P45452 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MMP13P45452 TFP1-202ENST00000475455 1573 ntBASIC20.09■□□□□ 0.81
MMP13P45452 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MMP13P45452 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MMP13P45452 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP13P45452 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.09■□□□□ 0.81
MMP13P45452 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.09■□□□□ 0.81
MMP13P45452 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.09■□□□□ 0.81
MMP13P45452 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP13P45452 AL121829.2-201ENST00000620908 328 ntBASIC20.09■□□□□ 0.81
MMP13P45452 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.09■□□□□ 0.81
MMP13P45452 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
MMP13P45452 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MMP13P45452 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MMP13P45452 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MMP13P45452 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP13P45452 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP13P45452 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.09■□□□□ 0.81
MMP13P45452 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP13P45452 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MMP13P45452 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP13P45452 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.09■□□□□ 0.81
MMP13P45452 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
MMP13P45452 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MMP13P45452 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MMP13P45452 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
MMP13P45452 AC007613.1-201ENST00000572811 2597 ntBASIC20.08■□□□□ 0.81
MMP13P45452 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MMP13P45452 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.08■□□□□ 0.81
MMP13P45452 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.08■□□□□ 0.81
MMP13P45452 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
MMP13P45452 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MMP13P45452 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
MMP13P45452 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
MMP13P45452 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MMP13P45452 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MMP13P45452 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.08■□□□□ 0.81
MMP13P45452 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
MMP13P45452 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MMP13P45452 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.08■□□□□ 0.81
MMP13P45452 POU5F1P3-201ENST00000428824 1078 ntBASIC20.08■□□□□ 0.81
MMP13P45452 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MMP13P45452 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.08■□□□□ 0.81
MMP13P45452 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.08■□□□□ 0.81
MMP13P45452 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.08■□□□□ 0.81
MMP13P45452 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.08■□□□□ 0.81
MMP13P45452 AC069544.1-201ENST00000609399 999 ntBASIC20.08■□□□□ 0.81
MMP13P45452 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MMP13P45452 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.08■□□□□ 0.8
MMP13P45452 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
MMP13P45452 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MMP13P45452 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MMP13P45452 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MMP13P45452 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
MMP13P45452 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MMP13P45452 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.08■□□□□ 0.8
MMP13P45452 AL049812.1-201ENST00000432563 2267 ntBASIC20.07■□□□□ 0.8
MMP13P45452 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP13P45452 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.07■□□□□ 0.8
MMP13P45452 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
MMP13P45452 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP13P45452 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP13P45452 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.07■□□□□ 0.8
MMP13P45452 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP13P45452 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP13P45452 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.07■□□□□ 0.8
MMP13P45452 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP13P45452 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MMP13P45452 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.07■□□□□ 0.8
MMP13P45452 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP13P45452 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.07■□□□□ 0.8
MMP13P45452 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.07■□□□□ 0.8
MMP13P45452 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MMP13P45452 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.07■□□□□ 0.8
MMP13P45452 AC006058.3-201ENST00000606217 1069 ntBASIC20.07■□□□□ 0.8
MMP13P45452 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MMP13P45452 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
MMP13P45452 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP13P45452 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP13P45452 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.07■□□□□ 0.8
MMP13P45452 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MMP13P45452 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.07■□□□□ 0.8
MMP13P45452 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP13P45452 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MMP13P45452 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP13P45452 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MMP13P45452 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MMP13P45452 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MMP13P45452 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP13P45452 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms