Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CXCL5P42830 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.03□□□□□ -0.32
CXCL5P42830 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL5P42830 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL5P42830 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL5P42830 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL5P42830 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CXCL5P42830 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL5P42830 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL5P42830 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL5P42830 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL5P42830 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.03□□□□□ -0.32
CXCL5P42830 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.03□□□□□ -0.32
CXCL5P42830 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.03□□□□□ -0.32
CXCL5P42830 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC13.03□□□□□ -0.32
CXCL5P42830 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.03□□□□□ -0.32
CXCL5P42830 AL138781.2-201ENST00000617896 1843 ntBASIC13.03□□□□□ -0.32
CXCL5P42830 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL5P42830 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.03□□□□□ -0.32
CXCL5P42830 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL5P42830 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL5P42830 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
CXCL5P42830 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.03□□□□□ -0.32
CXCL5P42830 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CXCL5P42830 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL5P42830 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL5P42830 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL5P42830 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CXCL5P42830 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CXCL5P42830 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.03□□□□□ -0.32
CXCL5P42830 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCL5P42830 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCL5P42830 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCL5P42830 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CXCL5P42830 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCL5P42830 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCL5P42830 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCL5P42830 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CXCL5P42830 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
CXCL5P42830 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 KRT18P68-201ENST00000392293 1000 ntBASIC13.02□□□□□ -0.33
CXCL5P42830 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.02□□□□□ -0.33
CXCL5P42830 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC13.02□□□□□ -0.33
CXCL5P42830 RARRES2P4-201ENST00000514074 484 ntBASIC13.02□□□□□ -0.33
CXCL5P42830 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.02□□□□□ -0.33
CXCL5P42830 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CXCL5P42830 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.02□□□□□ -0.33
CXCL5P42830 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CXCL5P42830 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CXCL5P42830 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CXCL5P42830 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CXCL5P42830 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CXCL5P42830 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
CXCL5P42830 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CXCL5P42830 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.01□□□□□ -0.33
CXCL5P42830 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 AP000997.3-201ENST00000623333 2250 ntBASIC13.01□□□□□ -0.33
CXCL5P42830 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CXCL5P42830 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
CXCL5P42830 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.01□□□□□ -0.33
CXCL5P42830 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.01□□□□□ -0.33
CXCL5P42830 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.01□□□□□ -0.33
CXCL5P42830 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.01□□□□□ -0.33
CXCL5P42830 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC13.01□□□□□ -0.33
CXCL5P42830 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CXCL5P42830 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CXCL5P42830 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.01□□□□□ -0.33
CXCL5P42830 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.01□□□□□ -0.33
CXCL5P42830 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms