Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC24.58■■□□□ 1.53
COL15A1P39059 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL15A1P39059 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL15A1P39059 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC24.58■■□□□ 1.53
COL15A1P39059 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC24.58■■□□□ 1.53
COL15A1P39059 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC24.58■■□□□ 1.53
COL15A1P39059 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC24.58■■□□□ 1.53
COL15A1P39059 AC116407.4-201ENST00000623319 1061 ntBASIC24.58■■□□□ 1.53
COL15A1P39059 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.58■■□□□ 1.53
COL15A1P39059 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
COL15A1P39059 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL15A1P39059 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL15A1P39059 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC24.58■■□□□ 1.53
COL15A1P39059 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL15A1P39059 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL15A1P39059 AC092667.1-201ENST00000434301 2586 ntBASIC24.58■■□□□ 1.53
COL15A1P39059 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC24.58■■□□□ 1.52
COL15A1P39059 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
COL15A1P39059 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
COL15A1P39059 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC24.57■■□□□ 1.52
COL15A1P39059 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL15A1P39059 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL15A1P39059 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL15A1P39059 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC24.57■■□□□ 1.52
COL15A1P39059 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL15A1P39059 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL15A1P39059 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
COL15A1P39059 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC24.57■■□□□ 1.52
COL15A1P39059 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC24.57■■□□□ 1.52
COL15A1P39059 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.57■■□□□ 1.52
COL15A1P39059 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC24.57■■□□□ 1.52
COL15A1P39059 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL15A1P39059 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL15A1P39059 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.57■■□□□ 1.52
COL15A1P39059 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC24.57■■□□□ 1.52
COL15A1P39059 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC24.57■■□□□ 1.52
COL15A1P39059 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC24.57■■□□□ 1.52
COL15A1P39059 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC24.57■■□□□ 1.52
COL15A1P39059 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL15A1P39059 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL15A1P39059 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL15A1P39059 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
COL15A1P39059 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
COL15A1P39059 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC24.56■■□□□ 1.52
COL15A1P39059 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL15A1P39059 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL15A1P39059 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL15A1P39059 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC24.56■■□□□ 1.52
COL15A1P39059 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL15A1P39059 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL15A1P39059 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL15A1P39059 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC24.56■■□□□ 1.52
COL15A1P39059 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
COL15A1P39059 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
COL15A1P39059 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC24.56■■□□□ 1.52
COL15A1P39059 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL15A1P39059 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL15A1P39059 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC24.56■■□□□ 1.52
COL15A1P39059 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
COL15A1P39059 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
COL15A1P39059 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
COL15A1P39059 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
COL15A1P39059 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC24.55■■□□□ 1.52
COL15A1P39059 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC24.55■■□□□ 1.52
COL15A1P39059 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC24.55■■□□□ 1.52
COL15A1P39059 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
COL15A1P39059 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL15A1P39059 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL15A1P39059 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
COL15A1P39059 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL15A1P39059 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
COL15A1P39059 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC24.55■■□□□ 1.52
COL15A1P39059 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL15A1P39059 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL15A1P39059 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC24.54■■□□□ 1.52
COL15A1P39059 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC24.54■■□□□ 1.52
COL15A1P39059 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
COL15A1P39059 AC083849.1-201ENST00000615227 514 ntBASIC24.54■■□□□ 1.52
COL15A1P39059 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
COL15A1P39059 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24.54■■□□□ 1.52
COL15A1P39059 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL15A1P39059 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
COL15A1P39059 TCF3P1-201ENST00000423021 1937 ntBASIC24.54■■□□□ 1.52
COL15A1P39059 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC24.54■■□□□ 1.52
COL15A1P39059 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.54■■□□□ 1.52
COL15A1P39059 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL15A1P39059 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
COL15A1P39059 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
COL15A1P39059 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC24.54■■□□□ 1.52
COL15A1P39059 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL15A1P39059 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
COL15A1P39059 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL15A1P39059 DAP-202ENST00000432074 1048 ntTSL 2 BASIC24.54■■□□□ 1.52
COL15A1P39059 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
COL15A1P39059 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC24.54■■□□□ 1.52
COL15A1P39059 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC24.54■■□□□ 1.52
COL15A1P39059 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC24.54■■□□□ 1.52
COL15A1P39059 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC24.53■■□□□ 1.52
COL15A1P39059 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC24.53■■□□□ 1.52
COL15A1P39059 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms