Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.29■□□□□ 0.68
HMGCLP35914 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.29■□□□□ 0.68
HMGCLP35914 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.29■□□□□ 0.68
HMGCLP35914 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.29■□□□□ 0.68
HMGCLP35914 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.29■□□□□ 0.68
HMGCLP35914 Z99916.2-201ENST00000604037 246 ntBASIC19.29■□□□□ 0.68
HMGCLP35914 AC131212.4-201ENST00000623606 975 ntBASIC19.29■□□□□ 0.68
HMGCLP35914 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLP35914 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLP35914 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLP35914 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLP35914 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGCLP35914 AL032819.2-201ENST00000624543 2162 ntBASIC19.29■□□□□ 0.68
HMGCLP35914 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLP35914 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLP35914 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLP35914 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HMGCLP35914 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.28■□□□□ 0.68
HMGCLP35914 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGCLP35914 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.28■□□□□ 0.68
HMGCLP35914 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HMGCLP35914 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLP35914 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGCLP35914 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLP35914 MIR718-201ENST00000390190 70 ntBASIC19.28■□□□□ 0.68
HMGCLP35914 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
HMGCLP35914 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLP35914 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLP35914 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.28■□□□□ 0.68
HMGCLP35914 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLP35914 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGCLP35914 AL049637.2-201ENST00000641778 930 ntBASIC19.28■□□□□ 0.68
HMGCLP35914 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLP35914 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGCLP35914 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HMGCLP35914 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLP35914 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGCLP35914 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLP35914 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.28■□□□□ 0.68
HMGCLP35914 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLP35914 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HMGCLP35914 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLP35914 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGCLP35914 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.27■□□□□ 0.68
HMGCLP35914 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.27■□□□□ 0.68
HMGCLP35914 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.27■□□□□ 0.68
HMGCLP35914 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
HMGCLP35914 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCLP35914 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCLP35914 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.27■□□□□ 0.68
HMGCLP35914 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCLP35914 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCLP35914 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.27■□□□□ 0.68
HMGCLP35914 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCLP35914 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.27■□□□□ 0.68
HMGCLP35914 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HMGCLP35914 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.27■□□□□ 0.68
HMGCLP35914 AC026271.3-201ENST00000571884 352 ntBASIC19.27■□□□□ 0.68
HMGCLP35914 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.27■□□□□ 0.68
HMGCLP35914 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCLP35914 CD177P1-201ENST00000606252 935 ntBASIC19.27■□□□□ 0.68
HMGCLP35914 CR392000.1-201ENST00000624770 1228 ntBASIC19.27■□□□□ 0.68
HMGCLP35914 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCLP35914 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCLP35914 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCLP35914 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMGCLP35914 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.27■□□□□ 0.67
HMGCLP35914 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HMGCLP35914 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.26■□□□□ 0.67
HMGCLP35914 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCLP35914 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCLP35914 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCLP35914 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCLP35914 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCLP35914 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HMGCLP35914 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCLP35914 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.26■□□□□ 0.67
HMGCLP35914 Z85996.1-201ENST00000494644 937 ntBASIC19.26■□□□□ 0.67
HMGCLP35914 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCLP35914 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HMGCLP35914 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.26■□□□□ 0.67
HMGCLP35914 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.26■□□□□ 0.67
HMGCLP35914 AL031985.4-201ENST00000642138 673 ntBASIC19.26■□□□□ 0.67
HMGCLP35914 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.26■□□□□ 0.67
HMGCLP35914 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCLP35914 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCLP35914 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGCLP35914 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HMGCLP35914 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCLP35914 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
HMGCLP35914 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCLP35914 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCLP35914 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.25■□□□□ 0.67
HMGCLP35914 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCLP35914 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
HMGCLP35914 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCLP35914 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCLP35914 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.25■□□□□ 0.67
HMGCLP35914 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCLP35914 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms