Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRT20P35900 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KRT20P35900 TREX1-205ENST00000625293 1783 ntBASIC18.37■□□□□ 0.53
KRT20P35900 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
KRT20P35900 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT20P35900 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.37■□□□□ 0.53
KRT20P35900 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.37■□□□□ 0.53
KRT20P35900 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT20P35900 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT20P35900 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.37■□□□□ 0.53
KRT20P35900 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KRT20P35900 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.37■□□□□ 0.53
KRT20P35900 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
KRT20P35900 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KRT20P35900 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.37■□□□□ 0.53
KRT20P35900 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.37■□□□□ 0.53
KRT20P35900 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KRT20P35900 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRT20P35900 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
KRT20P35900 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT20P35900 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
KRT20P35900 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT20P35900 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT20P35900 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT20P35900 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT20P35900 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT20P35900 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT20P35900 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
KRT20P35900 NEFHP1-201ENST00000412845 2629 ntBASIC18.36■□□□□ 0.53
KRT20P35900 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT20P35900 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
KRT20P35900 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT20P35900 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
KRT20P35900 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
KRT20P35900 UNC93B5-201ENST00000530315 699 ntBASIC18.36■□□□□ 0.53
KRT20P35900 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT20P35900 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT20P35900 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT20P35900 AC120498.9-201ENST00000339021 3867 ntBASIC18.36■□□□□ 0.53
KRT20P35900 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT20P35900 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
KRT20P35900 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT20P35900 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT20P35900 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT20P35900 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT20P35900 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT20P35900 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT20P35900 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT20P35900 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT20P35900 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT20P35900 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT20P35900 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KRT20P35900 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT20P35900 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
KRT20P35900 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT20P35900 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
KRT20P35900 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
KRT20P35900 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.35■□□□□ 0.53
KRT20P35900 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.35■□□□□ 0.53
KRT20P35900 UNC93B4-201ENST00000505679 747 ntBASIC18.35■□□□□ 0.53
KRT20P35900 AP003097.1-201ENST00000530657 1135 ntBASIC18.35■□□□□ 0.53
KRT20P35900 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.35■□□□□ 0.53
KRT20P35900 AC008687.6-201ENST00000596318 630 ntBASIC18.35■□□□□ 0.53
KRT20P35900 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT20P35900 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT20P35900 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT20P35900 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT20P35900 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
KRT20P35900 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT20P35900 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT20P35900 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT20P35900 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT20P35900 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT20P35900 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT20P35900 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT20P35900 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT20P35900 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT20P35900 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT20P35900 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT20P35900 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
KRT20P35900 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
KRT20P35900 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT20P35900 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms