Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RPA3P35244 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPA3P35244 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPA3P35244 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPA3P35244 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.54■□□□□ 0.72
RPA3P35244 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPA3P35244 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.54■□□□□ 0.72
RPA3P35244 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPA3P35244 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPA3P35244 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RPA3P35244 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPA3P35244 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.54■□□□□ 0.72
RPA3P35244 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPA3P35244 AC069152.1-201ENST00000438030 544 ntBASIC19.54■□□□□ 0.72
RPA3P35244 AC097658.1-201ENST00000475555 843 ntBASIC19.54■□□□□ 0.72
RPA3P35244 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.54■□□□□ 0.72
RPA3P35244 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RPA3P35244 AC098934.4-201ENST00000564127 592 ntBASIC19.54■□□□□ 0.72
RPA3P35244 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPA3P35244 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.54■□□□□ 0.72
RPA3P35244 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RPA3P35244 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RPA3P35244 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPA3P35244 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPA3P35244 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.54■□□□□ 0.72
RPA3P35244 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPA3P35244 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.53■□□□□ 0.72
RPA3P35244 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPA3P35244 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPA3P35244 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPA3P35244 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPA3P35244 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.53■□□□□ 0.72
RPA3P35244 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.53■□□□□ 0.72
RPA3P35244 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPA3P35244 AC091874.3-201ENST00000512672 1195 ntBASIC19.53■□□□□ 0.72
RPA3P35244 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.53■□□□□ 0.72
RPA3P35244 AC005332.8-201ENST00000622750 2735 ntBASIC19.53■□□□□ 0.72
RPA3P35244 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RPA3P35244 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RPA3P35244 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
RPA3P35244 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPA3P35244 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPA3P35244 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPA3P35244 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPA3P35244 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.53■□□□□ 0.72
RPA3P35244 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.53■□□□□ 0.72
RPA3P35244 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RPA3P35244 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RPA3P35244 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RPA3P35244 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
RPA3P35244 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPA3P35244 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RPA3P35244 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.52■□□□□ 0.72
RPA3P35244 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RPA3P35244 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPA3P35244 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPA3P35244 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.52■□□□□ 0.72
RPA3P35244 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RPA3P35244 AC073210.2-201ENST00000430369 194 ntBASIC19.52■□□□□ 0.72
RPA3P35244 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.52■□□□□ 0.72
RPA3P35244 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.52■□□□□ 0.72
RPA3P35244 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
RPA3P35244 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RPA3P35244 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RPA3P35244 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RPA3P35244 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.52■□□□□ 0.71
RPA3P35244 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RPA3P35244 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RPA3P35244 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
RPA3P35244 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPA3P35244 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPA3P35244 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPA3P35244 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RPA3P35244 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPA3P35244 AIRN-201ENST00000601203 4374 ntBASIC19.51■□□□□ 0.71
RPA3P35244 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.51■□□□□ 0.71
RPA3P35244 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.51■□□□□ 0.71
RPA3P35244 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.51■□□□□ 0.71
RPA3P35244 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPA3P35244 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPA3P35244 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RPA3P35244 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPA3P35244 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPA3P35244 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPA3P35244 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPA3P35244 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPA3P35244 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPA3P35244 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
RPA3P35244 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPA3P35244 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.5■□□□□ 0.71
RPA3P35244 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
RPA3P35244 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPA3P35244 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.5■□□□□ 0.71
RPA3P35244 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPA3P35244 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.5■□□□□ 0.71
RPA3P35244 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.5■□□□□ 0.71
RPA3P35244 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPA3P35244 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.5■□□□□ 0.71
RPA3P35244 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.5■□□□□ 0.71
RPA3P35244 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms