Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.32■□□□□ 0.2
APCP25054 AC027796.2-201ENST00000575326 344 ntBASIC16.32■□□□□ 0.2
APCP25054 AL353801.3-201ENST00000609898 542 ntBASIC16.32■□□□□ 0.2
APCP25054 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.32■□□□□ 0.2
APCP25054 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APCP25054 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.32■□□□□ 0.2
APCP25054 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.32■□□□□ 0.2
APCP25054 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
APCP25054 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
APCP25054 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
APCP25054 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
APCP25054 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.32■□□□□ 0.2
APCP25054 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.32■□□□□ 0.2
APCP25054 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.32■□□□□ 0.2
APCP25054 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.32■□□□□ 0.2
APCP25054 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.32■□□□□ 0.2
APCP25054 AC138894.3-201ENST00000603787 634 ntBASIC16.32■□□□□ 0.2
APCP25054 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
APCP25054 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APCP25054 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APCP25054 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.31■□□□□ 0.2
APCP25054 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.31■□□□□ 0.2
APCP25054 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APCP25054 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APCP25054 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.31■□□□□ 0.2
APCP25054 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APCP25054 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APCP25054 AC055717.3-201ENST00000622967 595 ntBASIC16.31■□□□□ 0.2
APCP25054 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APCP25054 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
APCP25054 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APCP25054 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
APCP25054 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APCP25054 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
APCP25054 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.31■□□□□ 0.2
APCP25054 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.31■□□□□ 0.2
APCP25054 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APCP25054 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
APCP25054 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.31■□□□□ 0.2
APCP25054 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APCP25054 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
APCP25054 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APCP25054 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
APCP25054 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
APCP25054 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.3■□□□□ 0.2
APCP25054 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
APCP25054 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APCP25054 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APCP25054 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APCP25054 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APCP25054 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APCP25054 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
APCP25054 TOB2P1-201ENST00000469761 992 ntBASIC16.3■□□□□ 0.2
APCP25054 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.3■□□□□ 0.2
APCP25054 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.3■□□□□ 0.2
APCP25054 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
APCP25054 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.3■□□□□ 0.2
APCP25054 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APCP25054 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
APCP25054 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.3■□□□□ 0.2
APCP25054 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.3■□□□□ 0.2
APCP25054 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
APCP25054 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APCP25054 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
APCP25054 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.3■□□□□ 0.2
APCP25054 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.3■□□□□ 0.2
APCP25054 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APCP25054 MIR662-201ENST00000384847 95 ntBASIC16.3■□□□□ 0.2
APCP25054 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.3■□□□□ 0.2
APCP25054 PMS2P2-201ENST00000425039 1128 ntBASIC16.3■□□□□ 0.2
APCP25054 KRT18P67-201ENST00000432816 1264 ntBASIC16.3■□□□□ 0.2
APCP25054 POLD2P1-201ENST00000511220 997 ntBASIC16.3■□□□□ 0.2
APCP25054 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
APCP25054 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.3■□□□□ 0.2
APCP25054 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APCP25054 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APCP25054 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.3■□□□□ 0.2
APCP25054 PHGDH-210ENST00000641115 1638 ntBASIC16.3■□□□□ 0.2
APCP25054 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
APCP25054 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APCP25054 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APCP25054 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
APCP25054 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.29■□□□□ 0.2
APCP25054 PGAM5P1-201ENST00000518923 814 ntBASIC16.29■□□□□ 0.2
APCP25054 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.29■□□□□ 0.2
APCP25054 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
APCP25054 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.29■□□□□ 0.2
APCP25054 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.29■□□□□ 0.2
APCP25054 AC243591.1-201ENST00000452967 1364 ntBASIC16.29■□□□□ 0.2
APCP25054 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.29■□□□□ 0.2
APCP25054 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APCP25054 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APCP25054 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.29■□□□□ 0.2
APCP25054 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.29■□□□□ 0.2
APCP25054 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.29■□□□□ 0.2
APCP25054 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APCP25054 AC036111.1-201ENST00000533973 1582 ntBASIC16.29■□□□□ 0.2
APCP25054 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
APCP25054 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APCP25054 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms