Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ATF1P18846 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.98■□□□□ 0.31
ATF1P18846 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.98■□□□□ 0.31
ATF1P18846 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ATF1P18846 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.97■□□□□ 0.31
ATF1P18846 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.97■□□□□ 0.31
ATF1P18846 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
ATF1P18846 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.97■□□□□ 0.31
ATF1P18846 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
ATF1P18846 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.97■□□□□ 0.31
ATF1P18846 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ATF1P18846 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 LSM12P1-201ENST00000411836 588 ntBASIC16.97■□□□□ 0.31
ATF1P18846 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.97■□□□□ 0.31
ATF1P18846 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.97■□□□□ 0.31
ATF1P18846 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.97■□□□□ 0.31
ATF1P18846 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.97■□□□□ 0.31
ATF1P18846 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.97■□□□□ 0.31
ATF1P18846 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.97■□□□□ 0.31
ATF1P18846 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.97■□□□□ 0.31
ATF1P18846 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ATF1P18846 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.97■□□□□ 0.31
ATF1P18846 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.97■□□□□ 0.31
ATF1P18846 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
ATF1P18846 TEX21P-204ENST00000641479 1693 ntBASIC16.97■□□□□ 0.31
ATF1P18846 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.97■□□□□ 0.31
ATF1P18846 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
ATF1P18846 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATF1P18846 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.96■□□□□ 0.31
ATF1P18846 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF1P18846 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
ATF1P18846 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATF1P18846 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF1P18846 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.96■□□□□ 0.31
ATF1P18846 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
ATF1P18846 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF1P18846 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF1P18846 AC141586.3-201ENST00000562166 1838 ntBASIC16.96■□□□□ 0.31
ATF1P18846 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF1P18846 AL133373.2-201ENST00000623187 2828 ntBASIC16.96■□□□□ 0.31
ATF1P18846 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATF1P18846 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATF1P18846 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ATF1P18846 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.96■□□□□ 0.31
ATF1P18846 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.96■□□□□ 0.31
ATF1P18846 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ATF1P18846 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.96■□□□□ 0.31
ATF1P18846 AC022517.1-201ENST00000592429 346 ntBASIC16.96■□□□□ 0.31
ATF1P18846 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATF1P18846 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF1P18846 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATF1P18846 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF1P18846 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.96■□□□□ 0.31
ATF1P18846 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATF1P18846 WIZP1-201ENST00000531444 2299 ntBASIC16.96■□□□□ 0.31
ATF1P18846 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF1P18846 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATF1P18846 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.3
ATF1P18846 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATF1P18846 AC090164.3-201ENST00000610780 2143 ntBASIC16.96■□□□□ 0.3
ATF1P18846 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATF1P18846 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF1P18846 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.95■□□□□ 0.3
ATF1P18846 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.95■□□□□ 0.3
ATF1P18846 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF1P18846 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF1P18846 AC004911.1-201ENST00000416316 871 ntBASIC16.95■□□□□ 0.3
ATF1P18846 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.95■□□□□ 0.3
ATF1P18846 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.95■□□□□ 0.3
ATF1P18846 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ATF1P18846 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF1P18846 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF1P18846 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF1P18846 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF1P18846 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATF1P18846 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms