Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNB1P11230 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNB1P11230 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNB1P11230 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNB1P11230 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CHRNB1P11230 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.63■□□□□ 0.73
CHRNB1P11230 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNB1P11230 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.63■□□□□ 0.73
CHRNB1P11230 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.63■□□□□ 0.73
CHRNB1P11230 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNB1P11230 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.63■□□□□ 0.73
CHRNB1P11230 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNB1P11230 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNB1P11230 AC026396.1-201ENST00000419388 421 ntBASIC19.63■□□□□ 0.73
CHRNB1P11230 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.63■□□□□ 0.73
CHRNB1P11230 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.63■□□□□ 0.73
CHRNB1P11230 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.63■□□□□ 0.73
CHRNB1P11230 AL136038.3-201ENST00000561909 1096 ntBASIC19.63■□□□□ 0.73
CHRNB1P11230 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.63■□□□□ 0.73
CHRNB1P11230 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CHRNB1P11230 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNB1P11230 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CHRNB1P11230 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNB1P11230 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNB1P11230 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNB1P11230 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNB1P11230 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.63■□□□□ 0.73
CHRNB1P11230 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CHRNB1P11230 PKD1P6-201ENST00000343738 4769 ntBASIC19.62■□□□□ 0.73
CHRNB1P11230 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNB1P11230 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
CHRNB1P11230 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNB1P11230 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNB1P11230 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CHRNB1P11230 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.62■□□□□ 0.73
CHRNB1P11230 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.62■□□□□ 0.73
CHRNB1P11230 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNB1P11230 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNB1P11230 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNB1P11230 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.62■□□□□ 0.73
CHRNB1P11230 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.62■□□□□ 0.73
CHRNB1P11230 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.62■□□□□ 0.73
CHRNB1P11230 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.62■□□□□ 0.73
CHRNB1P11230 CLEC4GP1-201ENST00000596555 870 ntBASIC19.62■□□□□ 0.73
CHRNB1P11230 AC069148.1-201ENST00000608741 768 ntBASIC19.62■□□□□ 0.73
CHRNB1P11230 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNB1P11230 LINC01465-201ENST00000408887 1940 ntBASIC19.62■□□□□ 0.73
CHRNB1P11230 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNB1P11230 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CHRNB1P11230 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CHRNB1P11230 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNB1P11230 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.61■□□□□ 0.73
CHRNB1P11230 KRT8P41-201ENST00000533985 1514 ntBASIC19.61■□□□□ 0.73
CHRNB1P11230 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.61■□□□□ 0.73
CHRNB1P11230 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CHRNB1P11230 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.61■□□□□ 0.73
CHRNB1P11230 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNB1P11230 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNB1P11230 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNB1P11230 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNB1P11230 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CHRNB1P11230 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNB1P11230 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNB1P11230 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CHRNB1P11230 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.61■□□□□ 0.73
CHRNB1P11230 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.61■□□□□ 0.73
CHRNB1P11230 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNB1P11230 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.61■□□□□ 0.73
CHRNB1P11230 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.61■□□□□ 0.73
CHRNB1P11230 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.61■□□□□ 0.73
CHRNB1P11230 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CHRNB1P11230 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNB1P11230 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNB1P11230 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNB1P11230 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNB1P11230 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CHRNB1P11230 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNB1P11230 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNB1P11230 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNB1P11230 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNB1P11230 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNB1P11230 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHRNB1P11230 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNB1P11230 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNB1P11230 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNB1P11230 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.6■□□□□ 0.73
CHRNB1P11230 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.6■□□□□ 0.73
CHRNB1P11230 VENTXP5-201ENST00000523979 775 ntBASIC19.6■□□□□ 0.73
CHRNB1P11230 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNB1P11230 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.6■□□□□ 0.73
CHRNB1P11230 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.6■□□□□ 0.73
CHRNB1P11230 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRNB1P11230 BX119927.1-201ENST00000636596 1552 ntBASIC19.6■□□□□ 0.73
CHRNB1P11230 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.6■□□□□ 0.73
CHRNB1P11230 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNB1P11230 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRNB1P11230 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNB1P11230 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNB1P11230 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRNB1P11230 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms