Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RARBP10826 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RARBP10826 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RARBP10826 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.69■■□□□ 1.06
RARBP10826 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.69■■□□□ 1.06
RARBP10826 VENTXP5-201ENST00000523979 775 ntBASIC21.69■■□□□ 1.06
RARBP10826 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RARBP10826 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.69■■□□□ 1.06
RARBP10826 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.69■■□□□ 1.06
RARBP10826 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RARBP10826 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.69■■□□□ 1.06
RARBP10826 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RARBP10826 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RARBP10826 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.69■■□□□ 1.06
RARBP10826 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RARBP10826 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RARBP10826 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.68■■□□□ 1.06
RARBP10826 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RARBP10826 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RARBP10826 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.68■■□□□ 1.06
RARBP10826 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.68■■□□□ 1.06
RARBP10826 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RARBP10826 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.68■■□□□ 1.06
RARBP10826 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.68■■□□□ 1.06
RARBP10826 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RARBP10826 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.68■■□□□ 1.06
RARBP10826 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.68■■□□□ 1.06
RARBP10826 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.68■■□□□ 1.06
RARBP10826 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RARBP10826 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.67■■□□□ 1.06
RARBP10826 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
RARBP10826 KRT8P41-201ENST00000533985 1514 ntBASIC21.67■■□□□ 1.06
RARBP10826 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.67■■□□□ 1.06
RARBP10826 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RARBP10826 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RARBP10826 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RARBP10826 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
RARBP10826 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.67■■□□□ 1.06
RARBP10826 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.67■■□□□ 1.06
RARBP10826 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RARBP10826 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.67■■□□□ 1.06
RARBP10826 AL136038.3-201ENST00000561909 1096 ntBASIC21.67■■□□□ 1.06
RARBP10826 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.67■■□□□ 1.06
RARBP10826 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RARBP10826 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.67■■□□□ 1.06
RARBP10826 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.66■■□□□ 1.06
RARBP10826 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RARBP10826 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RARBP10826 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RARBP10826 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RARBP10826 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RARBP10826 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.66■■□□□ 1.06
RARBP10826 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.66■■□□□ 1.06
RARBP10826 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.66■■□□□ 1.06
RARBP10826 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RARBP10826 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RARBP10826 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.66■■□□□ 1.06
RARBP10826 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.66■■□□□ 1.06
RARBP10826 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.66■■□□□ 1.06
RARBP10826 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.66■■□□□ 1.06
RARBP10826 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.66■■□□□ 1.06
RARBP10826 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.66■■□□□ 1.06
RARBP10826 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.66■■□□□ 1.06
RARBP10826 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RARBP10826 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RARBP10826 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RARBP10826 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.66■■□□□ 1.06
RARBP10826 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.66■■□□□ 1.06
RARBP10826 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.66■■□□□ 1.06
RARBP10826 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RARBP10826 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RARBP10826 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.65■■□□□ 1.06
RARBP10826 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RARBP10826 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.65■■□□□ 1.06
RARBP10826 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RARBP10826 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
RARBP10826 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RARBP10826 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.65■■□□□ 1.06
RARBP10826 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RARBP10826 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.65■■□□□ 1.06
RARBP10826 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RARBP10826 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RARBP10826 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.65■■□□□ 1.06
RARBP10826 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.65■■□□□ 1.06
RARBP10826 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.65■■□□□ 1.06
RARBP10826 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.65■■□□□ 1.06
RARBP10826 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.65■■□□□ 1.06
RARBP10826 CLEC4GP1-201ENST00000596555 870 ntBASIC21.65■■□□□ 1.06
RARBP10826 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.65■■□□□ 1.06
RARBP10826 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RARBP10826 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
RARBP10826 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RARBP10826 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RARBP10826 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RARBP10826 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RARBP10826 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RARBP10826 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RARBP10826 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
RARBP10826 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.64■■□□□ 1.06
RARBP10826 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms