Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSF1P09603 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSF1P09603 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSF1P09603 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.71■□□□□ 0.27
CSF1P09603 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.71■□□□□ 0.27
CSF1P09603 AC091799.1-201ENST00000422823 811 ntBASIC16.71■□□□□ 0.27
CSF1P09603 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSF1P09603 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.71■□□□□ 0.27
CSF1P09603 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSF1P09603 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.71■□□□□ 0.27
CSF1P09603 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSF1P09603 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.71■□□□□ 0.27
CSF1P09603 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSF1P09603 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSF1P09603 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CSF1P09603 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSF1P09603 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSF1P09603 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSF1P09603 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSF1P09603 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSF1P09603 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
CSF1P09603 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
CSF1P09603 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1P09603 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.7■□□□□ 0.26
CSF1P09603 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1P09603 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1P09603 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CSF1P09603 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CSF1P09603 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1P09603 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1P09603 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1P09603 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CSF1P09603 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.7■□□□□ 0.26
CSF1P09603 AL161938.1-201ENST00000569833 2180 ntBASIC16.7■□□□□ 0.26
CSF1P09603 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.7■□□□□ 0.26
CSF1P09603 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1P09603 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.7■□□□□ 0.26
CSF1P09603 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1P09603 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1P09603 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.7■□□□□ 0.26
CSF1P09603 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.7■□□□□ 0.26
CSF1P09603 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.7■□□□□ 0.26
CSF1P09603 AC142086.2-201ENST00000569753 217 ntBASIC16.7■□□□□ 0.26
CSF1P09603 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.7■□□□□ 0.26
CSF1P09603 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.7■□□□□ 0.26
CSF1P09603 AC005181.1-201ENST00000604782 1256 ntBASIC16.7■□□□□ 0.26
CSF1P09603 AC243732.1-201ENST00000612648 864 ntBASIC16.7■□□□□ 0.26
CSF1P09603 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.7■□□□□ 0.26
CSF1P09603 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CSF1P09603 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1P09603 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1P09603 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1P09603 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1P09603 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1P09603 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1P09603 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSF1P09603 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.7■□□□□ 0.26
CSF1P09603 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CSF1P09603 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1P09603 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1P09603 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.69■□□□□ 0.26
CSF1P09603 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.69■□□□□ 0.26
CSF1P09603 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.69■□□□□ 0.26
CSF1P09603 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1P09603 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1P09603 AC090164.3-201ENST00000610780 2143 ntBASIC16.69■□□□□ 0.26
CSF1P09603 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CSF1P09603 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CSF1P09603 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1P09603 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1P09603 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1P09603 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1P09603 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.69■□□□□ 0.26
CSF1P09603 TSPY20P-201ENST00000450910 630 ntBASIC16.69■□□□□ 0.26
CSF1P09603 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.69■□□□□ 0.26
CSF1P09603 AL356652.1-201ENST00000615962 565 ntBASIC16.69■□□□□ 0.26
CSF1P09603 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.69■□□□□ 0.26
CSF1P09603 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.69■□□□□ 0.26
CSF1P09603 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1P09603 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1P09603 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1P09603 AC006333.2-201ENST00000607957 2099 ntBASIC16.69■□□□□ 0.26
CSF1P09603 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CSF1P09603 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CSF1P09603 KRT8P17-201ENST00000453110 1448 ntBASIC16.69■□□□□ 0.26
CSF1P09603 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.69■□□□□ 0.26
CSF1P09603 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CSF1P09603 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1P09603 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.69■□□□□ 0.26
CSF1P09603 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSF1P09603 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.69■□□□□ 0.26
CSF1P09603 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CSF1P09603 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1P09603 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1P09603 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.68■□□□□ 0.26
CSF1P09603 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1P09603 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1P09603 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CSF1P09603 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSF1P09603 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms