Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.29■■□□□ 1
TPM1P09493 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.29■■□□□ 1
TPM1P09493 AC034268.1-201ENST00000441047 882 ntBASIC21.29■■□□□ 1
TPM1P09493 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.29■■□□□ 1
TPM1P09493 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.29■■□□□ 1
TPM1P09493 C2orf69P4-201ENST00000565394 541 ntBASIC21.29■■□□□ 1
TPM1P09493 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TPM1P09493 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TPM1P09493 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.29■■□□□ 1
TPM1P09493 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.29■■□□□ 1
TPM1P09493 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TPM1P09493 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.29■■□□□ 1
TPM1P09493 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.29■■□□□ 1
TPM1P09493 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.29■■□□□ 1
TPM1P09493 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TPM1P09493 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TPM1P09493 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TPM1P09493 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TPM1P09493 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TPM1P09493 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.28■■□□□ 1
TPM1P09493 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TPM1P09493 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.28■■□□□ 1
TPM1P09493 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
TPM1P09493 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TPM1P09493 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TPM1P09493 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.28■■□□□ 1
TPM1P09493 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.28■■□□□ 1
TPM1P09493 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.28■■□□□ 1
TPM1P09493 PKD1P1-201ENST00000458669 6805 ntBASIC21.28■■□□□ 1
TPM1P09493 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TPM1P09493 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TPM1P09493 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TPM1P09493 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TPM1P09493 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TPM1P09493 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.28■■□□□ 1
TPM1P09493 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
TPM1P09493 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TPM1P09493 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TPM1P09493 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TPM1P09493 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TPM1P09493 AL049812.1-201ENST00000432563 2267 ntBASIC21.27■■□□□ 1
TPM1P09493 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
TPM1P09493 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.27■■□□□ 1
TPM1P09493 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.27■■□□□ 1
TPM1P09493 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC21.27■■□□□ 1
TPM1P09493 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
TPM1P09493 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TPM1P09493 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TPM1P09493 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TPM1P09493 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.27■■□□□ 1
TPM1P09493 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TPM1P09493 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.27■■□□□ 1
TPM1P09493 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.27■■□□□ 1
TPM1P09493 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TPM1P09493 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.27■■□□□ 1
TPM1P09493 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TPM1P09493 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TPM1P09493 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
TPM1P09493 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TPM1P09493 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TPM1P09493 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
TPM1P09493 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
TPM1P09493 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TPM1P09493 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM1P09493 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TPM1P09493 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM1P09493 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TPM1P09493 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM1P09493 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM1P09493 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM1P09493 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM1P09493 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TPM1P09493 ZNRF2P3-201ENST00000424200 374 ntBASIC21.26■□□□□ 0.99
TPM1P09493 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.26■□□□□ 0.99
TPM1P09493 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TPM1P09493 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM1P09493 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TPM1P09493 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
TPM1P09493 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM1P09493 AL161938.1-201ENST00000569833 2180 ntBASIC21.26■□□□□ 0.99
TPM1P09493 AC018553.1-201ENST00000616682 1458 ntBASIC21.26■□□□□ 0.99
TPM1P09493 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM1P09493 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM1P09493 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TPM1P09493 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.25■□□□□ 0.99
TPM1P09493 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM1P09493 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM1P09493 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TPM1P09493 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
TPM1P09493 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM1P09493 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM1P09493 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM1P09493 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM1P09493 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM1P09493 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TPM1P09493 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM1P09493 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TPM1P09493 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM1P09493 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
TPM1P09493 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms