Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.02■□□□□ 0.64
CAPN1P07384 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.02■□□□□ 0.64
CAPN1P07384 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN1P07384 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.02■□□□□ 0.64
CAPN1P07384 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.02■□□□□ 0.64
CAPN1P07384 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN1P07384 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN1P07384 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN1P07384 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN1P07384 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CAPN1P07384 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CAPN1P07384 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CAPN1P07384 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CAPN1P07384 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.02■□□□□ 0.63
CAPN1P07384 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.02■□□□□ 0.63
CAPN1P07384 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CAPN1P07384 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CAPN1P07384 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CAPN1P07384 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CAPN1P07384 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CAPN1P07384 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN1P07384 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
CAPN1P07384 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN1P07384 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.01■□□□□ 0.63
CAPN1P07384 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN1P07384 AL032819.2-201ENST00000624543 2162 ntBASIC19.01■□□□□ 0.63
CAPN1P07384 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN1P07384 AL390719.1-204ENST00000412397 1219 ntBASIC19.01■□□□□ 0.63
CAPN1P07384 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.01■□□□□ 0.63
CAPN1P07384 AC133681.1-201ENST00000465482 601 ntBASIC19.01■□□□□ 0.63
CAPN1P07384 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.01■□□□□ 0.63
CAPN1P07384 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
CAPN1P07384 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.01■□□□□ 0.63
CAPN1P07384 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.01■□□□□ 0.63
CAPN1P07384 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CAPN1P07384 AC124016.1-201ENST00000609552 612 ntBASIC19.01■□□□□ 0.63
CAPN1P07384 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.01■□□□□ 0.63
CAPN1P07384 AIRN-201ENST00000601203 4374 ntBASIC19.01■□□□□ 0.63
CAPN1P07384 AC116351.2-201ENST00000606540 1585 ntBASIC19.01■□□□□ 0.63
CAPN1P07384 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN1P07384 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.01■□□□□ 0.63
CAPN1P07384 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.01■□□□□ 0.63
CAPN1P07384 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.01■□□□□ 0.63
CAPN1P07384 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.01■□□□□ 0.63
CAPN1P07384 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CAPN1P07384 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CAPN1P07384 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CAPN1P07384 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN1P07384 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN1P07384 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19■□□□□ 0.63
CAPN1P07384 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19■□□□□ 0.63
CAPN1P07384 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN1P07384 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19■□□□□ 0.63
CAPN1P07384 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
CAPN1P07384 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19■□□□□ 0.63
CAPN1P07384 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19■□□□□ 0.63
CAPN1P07384 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN1P07384 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19■□□□□ 0.63
CAPN1P07384 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19■□□□□ 0.63
CAPN1P07384 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19■□□□□ 0.63
CAPN1P07384 HES2-206ENST00000489730 730 ntTSL 2 BASIC19■□□□□ 0.63
CAPN1P07384 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19■□□□□ 0.63
CAPN1P07384 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CAPN1P07384 AL023875.1-201ENST00000640777 796 ntBASIC19■□□□□ 0.63
CAPN1P07384 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19■□□□□ 0.63
CAPN1P07384 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19■□□□□ 0.63
CAPN1P07384 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN1P07384 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19■□□□□ 0.63
CAPN1P07384 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN1P07384 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19■□□□□ 0.63
CAPN1P07384 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19■□□□□ 0.63
CAPN1P07384 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN1P07384 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CAPN1P07384 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19■□□□□ 0.63
CAPN1P07384 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19■□□□□ 0.63
CAPN1P07384 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN1P07384 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN1P07384 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN1P07384 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN1P07384 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.99■□□□□ 0.63
CAPN1P07384 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN1P07384 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CAPN1P07384 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CAPN1P07384 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CAPN1P07384 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN1P07384 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CAPN1P07384 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN1P07384 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.99■□□□□ 0.63
CAPN1P07384 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.99■□□□□ 0.63
CAPN1P07384 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN1P07384 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.99■□□□□ 0.63
CAPN1P07384 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.99■□□□□ 0.63
CAPN1P07384 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.99■□□□□ 0.63
CAPN1P07384 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.99■□□□□ 0.63
CAPN1P07384 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN1P07384 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CAPN1P07384 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CAPN1P07384 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.99■□□□□ 0.63
CAPN1P07384 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.99■□□□□ 0.63
CAPN1P07384 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms