Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC1P02654 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
APOC1P02654 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.09■□□□□ 0.33
APOC1P02654 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC1P02654 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.09■□□□□ 0.33
APOC1P02654 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
APOC1P02654 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.08■□□□□ 0.33
APOC1P02654 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
APOC1P02654 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
APOC1P02654 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
APOC1P02654 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
APOC1P02654 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APOC1P02654 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APOC1P02654 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APOC1P02654 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APOC1P02654 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APOC1P02654 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APOC1P02654 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APOC1P02654 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APOC1P02654 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APOC1P02654 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.08■□□□□ 0.32
APOC1P02654 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.08■□□□□ 0.32
APOC1P02654 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.08■□□□□ 0.32
APOC1P02654 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.08■□□□□ 0.32
APOC1P02654 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
APOC1P02654 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.08■□□□□ 0.32
APOC1P02654 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APOC1P02654 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.08■□□□□ 0.32
APOC1P02654 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.08■□□□□ 0.32
APOC1P02654 AL121906.2-201ENST00000621597 723 ntBASIC17.08■□□□□ 0.32
APOC1P02654 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APOC1P02654 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
APOC1P02654 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
APOC1P02654 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.08■□□□□ 0.32
APOC1P02654 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.08■□□□□ 0.32
APOC1P02654 Z82202.1-201ENST00000623446 1880 ntBASIC17.07■□□□□ 0.32
APOC1P02654 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.07■□□□□ 0.32
APOC1P02654 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.07■□□□□ 0.32
APOC1P02654 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APOC1P02654 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.07■□□□□ 0.32
APOC1P02654 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APOC1P02654 AC092368.3-202ENST00000574180 1591 ntBASIC17.07■□□□□ 0.32
APOC1P02654 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
APOC1P02654 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.07■□□□□ 0.32
APOC1P02654 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APOC1P02654 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
APOC1P02654 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
APOC1P02654 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.07■□□□□ 0.32
APOC1P02654 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APOC1P02654 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.07■□□□□ 0.32
APOC1P02654 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.07■□□□□ 0.32
APOC1P02654 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APOC1P02654 AL138781.1-201ENST00000566567 1274 ntBASIC17.07■□□□□ 0.32
APOC1P02654 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.07■□□□□ 0.32
APOC1P02654 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.07■□□□□ 0.32
APOC1P02654 AC060766.5-201ENST00000590539 871 ntBASIC17.07■□□□□ 0.32
APOC1P02654 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
APOC1P02654 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
APOC1P02654 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.07■□□□□ 0.32
APOC1P02654 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
APOC1P02654 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APOC1P02654 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APOC1P02654 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APOC1P02654 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
APOC1P02654 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOC1P02654 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOC1P02654 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.06■□□□□ 0.32
APOC1P02654 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOC1P02654 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOC1P02654 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOC1P02654 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOC1P02654 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.06■□□□□ 0.32
APOC1P02654 GUSBP6-202ENST00000438529 1198 ntBASIC17.06■□□□□ 0.32
APOC1P02654 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APOC1P02654 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.06■□□□□ 0.32
APOC1P02654 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.06■□□□□ 0.32
APOC1P02654 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.06■□□□□ 0.32
APOC1P02654 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.06■□□□□ 0.32
APOC1P02654 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.06■□□□□ 0.32
APOC1P02654 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.06■□□□□ 0.32
APOC1P02654 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
APOC1P02654 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APOC1P02654 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOC1P02654 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
APOC1P02654 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.06■□□□□ 0.32
APOC1P02654 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.06■□□□□ 0.32
APOC1P02654 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOC1P02654 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOC1P02654 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APOC1P02654 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOC1P02654 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APOC1P02654 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOC1P02654 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.05■□□□□ 0.32
APOC1P02654 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.05■□□□□ 0.32
APOC1P02654 RPS2P52-201ENST00000469610 820 ntBASIC17.05■□□□□ 0.32
APOC1P02654 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.05■□□□□ 0.32
APOC1P02654 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
APOC1P02654 AC006557.6-201ENST00000623071 864 ntBASIC17.05■□□□□ 0.32
APOC1P02654 MYC-209ENST00000641252 345 ntBASIC17.05■□□□□ 0.32
APOC1P02654 AC133041.1-202ENST00000642053 222 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms