Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT6AP02538 AC069152.1-201ENST00000438030 544 ntBASIC18.73■□□□□ 0.59
KRT6AP02538 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT6AP02538 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.73■□□□□ 0.59
KRT6AP02538 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT6AP02538 AC098934.4-201ENST00000564127 592 ntBASIC18.73■□□□□ 0.59
KRT6AP02538 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.73■□□□□ 0.59
KRT6AP02538 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.73■□□□□ 0.59
KRT6AP02538 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
KRT6AP02538 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.73■□□□□ 0.59
KRT6AP02538 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT6AP02538 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT6AP02538 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT6AP02538 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT6AP02538 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
KRT6AP02538 KRT8P8-201ENST00000434750 1448 ntBASIC18.73■□□□□ 0.59
KRT6AP02538 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT6AP02538 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT6AP02538 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT6AP02538 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT6AP02538 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT6AP02538 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT6AP02538 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT6AP02538 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT6AP02538 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT6AP02538 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT6AP02538 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT6AP02538 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT6AP02538 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.72■□□□□ 0.59
KRT6AP02538 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.72■□□□□ 0.59
KRT6AP02538 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT6AP02538 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.72■□□□□ 0.59
KRT6AP02538 SOX15-203ENST00000570788 1093 ntBASIC18.72■□□□□ 0.59
KRT6AP02538 AL121829.2-201ENST00000620908 328 ntBASIC18.72■□□□□ 0.59
KRT6AP02538 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT6AP02538 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT6AP02538 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT6AP02538 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT6AP02538 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT6AP02538 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT6AP02538 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
KRT6AP02538 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT6AP02538 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT6AP02538 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT6AP02538 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT6AP02538 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
KRT6AP02538 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT6AP02538 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT6AP02538 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT6AP02538 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT6AP02538 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT6AP02538 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
KRT6AP02538 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT6AP02538 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
KRT6AP02538 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT6AP02538 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT6AP02538 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.71■□□□□ 0.59
KRT6AP02538 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.71■□□□□ 0.59
KRT6AP02538 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
KRT6AP02538 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
KRT6AP02538 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT6AP02538 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.71■□□□□ 0.59
KRT6AP02538 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.71■□□□□ 0.59
KRT6AP02538 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
KRT6AP02538 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT6AP02538 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT6AP02538 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT6AP02538 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT6AP02538 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6AP02538 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6AP02538 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6AP02538 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6AP02538 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6AP02538 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
KRT6AP02538 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
KRT6AP02538 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
KRT6AP02538 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6AP02538 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6AP02538 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6AP02538 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT6AP02538 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
KRT6AP02538 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KRT6AP02538 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6AP02538 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
KRT6AP02538 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6AP02538 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT6AP02538 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.7■□□□□ 0.58
KRT6AP02538 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.7■□□□□ 0.58
KRT6AP02538 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6AP02538 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.7■□□□□ 0.58
KRT6AP02538 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.7■□□□□ 0.58
KRT6AP02538 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.7■□□□□ 0.58
KRT6AP02538 AC008687.6-201ENST00000596318 630 ntBASIC18.7■□□□□ 0.58
KRT6AP02538 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
KRT6AP02538 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6AP02538 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6AP02538 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT6AP02538 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT6AP02538 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT6AP02538 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms