Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC8.66□□□□□ -1.02
USH2AO75445 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC8.66□□□□□ -1.02
USH2AO75445 AC005332.3-201ENST00000589904 676 ntBASIC8.66□□□□□ -1.02
USH2AO75445 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC8.66□□□□□ -1.02
USH2AO75445 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC8.66□□□□□ -1.02
USH2AO75445 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 CA15P1-201ENST00000481698 905 ntBASIC8.66□□□□□ -1.02
USH2AO75445 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC8.66□□□□□ -1.02
USH2AO75445 WDR6-223ENST00000627177 207 ntTSL 2 BASIC8.66□□□□□ -1.02
USH2AO75445 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
USH2AO75445 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC8.66□□□□□ -1.02
USH2AO75445 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
USH2AO75445 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC8.66□□□□□ -1.02
USH2AO75445 CD37-204ENST00000535669 1674 ntTSL 2 BASIC8.66□□□□□ -1.02
USH2AO75445 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
USH2AO75445 HLA-F-220ENST00000434407 884 ntBASIC8.66□□□□□ -1.02
USH2AO75445 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC8.66□□□□□ -1.02
USH2AO75445 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC8.66□□□□□ -1.02
USH2AO75445 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
USH2AO75445 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 CCNC-219ENST00000627680 896 ntTSL 5 BASIC8.66□□□□□ -1.02
USH2AO75445 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
USH2AO75445 ME2-208ENST00000638937 2471 ntTSL 5 BASIC8.65□□□□□ -1.02
USH2AO75445 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
USH2AO75445 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
USH2AO75445 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
USH2AO75445 TBC1D3P2-202ENST00000577902 1649 ntBASIC8.65□□□□□ -1.02
USH2AO75445 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
USH2AO75445 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
USH2AO75445 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC8.65□□□□□ -1.02
USH2AO75445 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
USH2AO75445 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
USH2AO75445 RPL13AP23-201ENST00000480739 586 ntBASIC8.65□□□□□ -1.02
USH2AO75445 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC8.65□□□□□ -1.02
USH2AO75445 AC010327.4-202ENST00000591484 748 ntBASIC8.65□□□□□ -1.02
USH2AO75445 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
USH2AO75445 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC8.65□□□□□ -1.02
USH2AO75445 TP73-AS1-207ENST00000624167 988 ntBASIC8.65□□□□□ -1.02
USH2AO75445 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
USH2AO75445 STAC-204ENST00000457375 1366 ntTSL 2 BASIC8.65□□□□□ -1.02
USH2AO75445 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
USH2AO75445 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC8.65□□□□□ -1.02
USH2AO75445 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
USH2AO75445 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
USH2AO75445 HNRNPA1P28-201ENST00000424481 961 ntBASIC8.65□□□□□ -1.02
USH2AO75445 DHDH-204ENST00000523250 634 ntTSL 5 BASIC8.65□□□□□ -1.02
USH2AO75445 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC8.65□□□□□ -1.02
USH2AO75445 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
USH2AO75445 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
USH2AO75445 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
USH2AO75445 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
USH2AO75445 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
USH2AO75445 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
USH2AO75445 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC8.65□□□□□ -1.02
USH2AO75445 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
USH2AO75445 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC8.65□□□□□ -1.02
USH2AO75445 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC8.65□□□□□ -1.03
USH2AO75445 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
USH2AO75445 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
USH2AO75445 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
USH2AO75445 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
USH2AO75445 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
USH2AO75445 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
USH2AO75445 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
USH2AO75445 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
USH2AO75445 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
USH2AO75445 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC8.65□□□□□ -1.03
USH2AO75445 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC8.65□□□□□ -1.03
USH2AO75445 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC8.65□□□□□ -1.03
USH2AO75445 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
USH2AO75445 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
USH2AO75445 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
USH2AO75445 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
USH2AO75445 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC8.64□□□□□ -1.03
USH2AO75445 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
USH2AO75445 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
USH2AO75445 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
USH2AO75445 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC8.64□□□□□ -1.03
USH2AO75445 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC8.64□□□□□ -1.03
USH2AO75445 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
USH2AO75445 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC8.64□□□□□ -1.03
USH2AO75445 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC8.64□□□□□ -1.03
USH2AO75445 DYM-203ENST00000442713 2147 ntTSL 2 BASIC8.64□□□□□ -1.03
USH2AO75445 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
USH2AO75445 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC8.64□□□□□ -1.03
USH2AO75445 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
USH2AO75445 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
USH2AO75445 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms