Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
PCDH7O60245 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
PCDH7O60245 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDH7O60245 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDH7O60245 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH7O60245 AP003097.1-201ENST00000530657 1135 ntBASIC18.47■□□□□ 0.55
PCDH7O60245 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.47■□□□□ 0.55
PCDH7O60245 PRKY-204ENST00000533551 1019 ntBASIC18.47■□□□□ 0.55
PCDH7O60245 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH7O60245 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 AC008403.3-201ENST00000598924 454 ntBASIC18.47■□□□□ 0.55
PCDH7O60245 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PCDH7O60245 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 TNXA-203ENST00000507684 2038 ntBASIC18.47■□□□□ 0.55
PCDH7O60245 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH7O60245 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 TEX21P-204ENST00000641479 1693 ntBASIC18.47■□□□□ 0.55
PCDH7O60245 LINC01465-201ENST00000408887 1940 ntBASIC18.47■□□□□ 0.55
PCDH7O60245 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDH7O60245 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCDH7O60245 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDH7O60245 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH7O60245 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH7O60245 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH7O60245 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH7O60245 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH7O60245 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PCDH7O60245 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH7O60245 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH7O60245 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCDH7O60245 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH7O60245 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PCDH7O60245 AC104417.2-201ENST00000562989 1793 ntBASIC18.46■□□□□ 0.55
PCDH7O60245 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
PCDH7O60245 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH7O60245 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.46■□□□□ 0.55
PCDH7O60245 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH7O60245 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH7O60245 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH7O60245 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH7O60245 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCDH7O60245 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH7O60245 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH7O60245 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDH7O60245 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDH7O60245 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDH7O60245 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDH7O60245 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH7O60245 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
PCDH7O60245 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH7O60245 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH7O60245 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PCDH7O60245 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH7O60245 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH7O60245 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
PCDH7O60245 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH7O60245 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDH7O60245 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH7O60245 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH7O60245 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH7O60245 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH7O60245 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH7O60245 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDH7O60245 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH7O60245 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH7O60245 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
PCDH7O60245 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PCDH7O60245 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH7O60245 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH7O60245 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH7O60245 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH7O60245 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH7O60245 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH7O60245 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDH7O60245 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDH7O60245 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDH7O60245 AC141586.3-201ENST00000562166 1838 ntBASIC18.44■□□□□ 0.54
PCDH7O60245 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDH7O60245 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH7O60245 AC004408.2-201ENST00000623613 2777 ntBASIC18.44■□□□□ 0.54
PCDH7O60245 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH7O60245 SDHAP1-207ENST00000440850 2000 ntBASIC18.44■□□□□ 0.54
PCDH7O60245 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH7O60245 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
PCDH7O60245 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDH7O60245 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms