Protein–RNA interactions for Protein: O15160

POLR1C, DNA-directed RNA polymerases I and III subunit RPAC1, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1CO15160 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1CO15160 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR1CO15160 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
POLR1CO15160 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1CO15160 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
POLR1CO15160 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
POLR1CO15160 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1CO15160 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR1CO15160 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.63■□□□□ 0.57
POLR1CO15160 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1CO15160 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1CO15160 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
POLR1CO15160 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR1CO15160 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR1CO15160 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1CO15160 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1CO15160 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1CO15160 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.62■□□□□ 0.57
POLR1CO15160 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1CO15160 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1CO15160 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR1CO15160 AL137013.1-201ENST00000432946 1228 ntBASIC18.62■□□□□ 0.57
POLR1CO15160 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR1CO15160 C2orf69P3-201ENST00000565542 1120 ntBASIC18.62■□□□□ 0.57
POLR1CO15160 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.62■□□□□ 0.57
POLR1CO15160 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR1CO15160 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1CO15160 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.62■□□□□ 0.57
POLR1CO15160 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1CO15160 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1CO15160 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1CO15160 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1CO15160 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1CO15160 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR1CO15160 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1CO15160 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1CO15160 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1CO15160 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
POLR1CO15160 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
POLR1CO15160 AL512408.1-201ENST00000569378 2000 ntBASIC18.61■□□□□ 0.57
POLR1CO15160 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.61■□□□□ 0.57
POLR1CO15160 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR1CO15160 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
POLR1CO15160 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.61■□□□□ 0.57
POLR1CO15160 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
POLR1CO15160 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1CO15160 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
POLR1CO15160 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.61■□□□□ 0.57
POLR1CO15160 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1CO15160 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1CO15160 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.61■□□□□ 0.57
POLR1CO15160 AC011506.1-201ENST00000474329 610 ntBASIC18.61■□□□□ 0.57
POLR1CO15160 AC097488.1-201ENST00000507834 756 ntBASIC18.61■□□□□ 0.57
POLR1CO15160 AL049597.2-201ENST00000565575 961 ntBASIC18.61■□□□□ 0.57
POLR1CO15160 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
POLR1CO15160 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.61■□□□□ 0.57
POLR1CO15160 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1CO15160 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1CO15160 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR1CO15160 AFG3L1P-217ENST00000557444 2447 ntBASIC18.61■□□□□ 0.57
POLR1CO15160 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1CO15160 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
POLR1CO15160 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
POLR1CO15160 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1CO15160 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR1CO15160 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1CO15160 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR1CO15160 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
POLR1CO15160 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1CO15160 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR1CO15160 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1CO15160 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR1CO15160 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1CO15160 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1CO15160 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1CO15160 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1CO15160 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1CO15160 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1CO15160 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR1CO15160 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
POLR1CO15160 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
POLR1CO15160 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1CO15160 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1CO15160 AP005242.2-201ENST00000580065 1175 ntBASIC18.6■□□□□ 0.57
POLR1CO15160 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1CO15160 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR1CO15160 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1CO15160 AL162377.1-201ENST00000618844 1793 ntBASIC18.6■□□□□ 0.57
POLR1CO15160 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
POLR1CO15160 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1CO15160 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1CO15160 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.59■□□□□ 0.57
POLR1CO15160 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1CO15160 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.59■□□□□ 0.57
POLR1CO15160 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.59■□□□□ 0.57
POLR1CO15160 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1CO15160 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1CO15160 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1CO15160 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
POLR1CO15160 CRYGFP-201ENST00000418459 633 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms