Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
CUX2O14529 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC33.22■■■□□ 2.91
CUX2O14529 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC33.22■■■□□ 2.91
CUX2O14529 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC33.22■■■□□ 2.91
CUX2O14529 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC33.22■■■□□ 2.91
CUX2O14529 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
CUX2O14529 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
CUX2O14529 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC33.22■■■□□ 2.91
CUX2O14529 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
CUX2O14529 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
CUX2O14529 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
CUX2O14529 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CUX2O14529 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC33.21■■■□□ 2.91
CUX2O14529 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC33.21■■■□□ 2.91
CUX2O14529 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC33.21■■■□□ 2.91
CUX2O14529 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CUX2O14529 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CUX2O14529 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
CUX2O14529 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC33.21■■■□□ 2.91
CUX2O14529 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
CUX2O14529 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CUX2O14529 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC33.21■■■□□ 2.91
CUX2O14529 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
CUX2O14529 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC33.2■■■□□ 2.91
CUX2O14529 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
CUX2O14529 HLA-J-203ENST00000494367 1087 ntBASIC33.2■■■□□ 2.91
CUX2O14529 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC33.2■■■□□ 2.91
CUX2O14529 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC33.2■■■□□ 2.91
CUX2O14529 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC33.2■■■□□ 2.91
CUX2O14529 AC112497.1-201ENST00000624824 639 ntBASIC33.2■■■□□ 2.91
CUX2O14529 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
CUX2O14529 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC33.2■■■□□ 2.91
CUX2O14529 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC33.2■■■□□ 2.91
CUX2O14529 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC33.2■■■□□ 2.91
CUX2O14529 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC33.2■■■□□ 2.9
CUX2O14529 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC33.2■■■□□ 2.9
CUX2O14529 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
CUX2O14529 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC33.19■■■□□ 2.9
CUX2O14529 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
CUX2O14529 RPL18-209ENST00000550645 463 ntTSL 5 BASIC33.19■■■□□ 2.9
CUX2O14529 RPL18-214ENST00000552588 559 ntTSL 3 BASIC33.19■■■□□ 2.9
CUX2O14529 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC33.19■■■□□ 2.9
CUX2O14529 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC33.19■■■□□ 2.9
CUX2O14529 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC33.19■■■□□ 2.9
CUX2O14529 GOLGA6L3-201ENST00000507199 1679 ntBASIC33.19■■■□□ 2.9
CUX2O14529 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
CUX2O14529 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC33.18■■■□□ 2.9
CUX2O14529 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
CUX2O14529 AC104819.1-201ENST00000504587 486 ntBASIC33.18■■■□□ 2.9
CUX2O14529 PIN1-206ENST00000587625 878 ntTSL 2 BASIC33.18■■■□□ 2.9
CUX2O14529 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
CUX2O14529 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
CUX2O14529 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC33.18■■■□□ 2.9
CUX2O14529 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
CUX2O14529 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC33.18■■■□□ 2.9
CUX2O14529 UPF3AP3-201ENST00000420996 769 ntBASIC33.18■■■□□ 2.9
CUX2O14529 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC33.18■■■□□ 2.9
CUX2O14529 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC33.18■■■□□ 2.9
CUX2O14529 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC33.18■■■□□ 2.9
CUX2O14529 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC33.17■■■□□ 2.9
CUX2O14529 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
CUX2O14529 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC33.17■■■□□ 2.9
CUX2O14529 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC33.17■■■□□ 2.9
CUX2O14529 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC33.17■■■□□ 2.9
CUX2O14529 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
CUX2O14529 AL024507.2-201ENST00000606070 2574 ntBASIC33.17■■■□□ 2.9
CUX2O14529 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
CUX2O14529 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
CUX2O14529 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
CUX2O14529 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CUX2O14529 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
CUX2O14529 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
CUX2O14529 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CUX2O14529 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CUX2O14529 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CUX2O14529 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC33.16■■■□□ 2.9
CUX2O14529 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
CUX2O14529 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC33.16■■■□□ 2.9
CUX2O14529 ILF2-202ENST00000368681 726 ntTSL 2 BASIC33.16■■■□□ 2.9
CUX2O14529 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
CUX2O14529 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC33.16■■■□□ 2.9
CUX2O14529 AL031284.1-201ENST00000419297 478 ntBASIC33.16■■■□□ 2.9
CUX2O14529 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC33.16■■■□□ 2.9
CUX2O14529 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC33.15■■■□□ 2.9
CUX2O14529 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC33.15■■■□□ 2.9
CUX2O14529 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
CUX2O14529 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
CUX2O14529 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
CUX2O14529 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
CUX2O14529 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
CUX2O14529 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CUX2O14529 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CUX2O14529 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CUX2O14529 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CUX2O14529 HES2-202ENST00000377836 507 ntTSL 2 BASIC33.14■■■□□ 2.9
CUX2O14529 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CUX2O14529 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC33.14■■■□□ 2.9
CUX2O14529 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC33.14■■■□□ 2.9
CUX2O14529 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CUX2O14529 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms