Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC104417.2-201ENST00000562989 1793 ntBASIC18.63■□□□□ 0.57
SLC28A1O00337 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SLC28A1O00337 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC28A1O00337 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A1O00337 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A1O00337 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
SLC28A1O00337 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
SLC28A1O00337 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A1O00337 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A1O00337 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A1O00337 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC28A1O00337 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC28A1O00337 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A1O00337 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A1O00337 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.62■□□□□ 0.57
SLC28A1O00337 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC28A1O00337 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC28A1O00337 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.62■□□□□ 0.57
SLC28A1O00337 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
SLC28A1O00337 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.62■□□□□ 0.57
SLC28A1O00337 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC28A1O00337 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.62■□□□□ 0.57
SLC28A1O00337 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A1O00337 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A1O00337 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A1O00337 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SLC28A1O00337 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC28A1O00337 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A1O00337 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC28A1O00337 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC28A1O00337 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC28A1O00337 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC28A1O00337 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A1O00337 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
SLC28A1O00337 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC28A1O00337 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A1O00337 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A1O00337 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A1O00337 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A1O00337 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SLC28A1O00337 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A1O00337 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC28A1O00337 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A1O00337 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A1O00337 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A1O00337 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
SLC28A1O00337 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC28A1O00337 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC28A1O00337 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC28A1O00337 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SLC28A1O00337 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC28A1O00337 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC28A1O00337 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.61■□□□□ 0.57
SLC28A1O00337 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.61■□□□□ 0.57
SLC28A1O00337 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.61■□□□□ 0.57
SLC28A1O00337 AC120498.8-201ENST00000614275 531 ntBASIC18.61■□□□□ 0.57
SLC28A1O00337 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A1O00337 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SLC28A1O00337 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SLC28A1O00337 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC28A1O00337 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A1O00337 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A1O00337 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SLC28A1O00337 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SLC28A1O00337 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC28A1O00337 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A1O00337 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC28A1O00337 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SLC28A1O00337 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.6■□□□□ 0.57
SLC28A1O00337 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.6■□□□□ 0.57
SLC28A1O00337 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC28A1O00337 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
SLC28A1O00337 AL121829.2-201ENST00000620908 328 ntBASIC18.6■□□□□ 0.57
SLC28A1O00337 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A1O00337 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SLC28A1O00337 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A1O00337 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A1O00337 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A1O00337 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.6■□□□□ 0.57
SLC28A1O00337 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC28A1O00337 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
SLC28A1O00337 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A1O00337 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A1O00337 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A1O00337 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A1O00337 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
SLC28A1O00337 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A1O00337 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
SLC28A1O00337 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A1O00337 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC28A1O00337 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A1O00337 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC28A1O00337 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A1O00337 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC28A1O00337 TUBB8P6-201ENST00000436895 1288 ntBASIC18.59■□□□□ 0.57
SLC28A1O00337 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC28A1O00337 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC28A1O00337 KRT18P16-201ENST00000510337 1294 ntBASIC18.59■□□□□ 0.57
SLC28A1O00337 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A1O00337 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms