Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.39■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.39■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SLC25A1P2-201ENST00000430693 912 ntBASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 KRT8P41-201ENST00000533985 1514 ntBASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.39■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 TERF1P1-201ENST00000311003 1181 ntBASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 ATP5G1P1-201ENST00000448724 379 ntBASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 ECEL1P2-202ENST00000465689 757 ntBASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 AC010331.1-201ENST00000611423 582 ntBASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms