Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.15■□□□□ 0.34
NPIPB4C9JG80 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPB4C9JG80 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPIPB4C9JG80 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
NPIPB4C9JG80 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
NPIPB4C9JG80 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 KRASP1-201ENST00000407852 552 ntBASIC17.14■□□□□ 0.33
NPIPB4C9JG80 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 AC124016.1-201ENST00000609552 612 ntBASIC17.14■□□□□ 0.33
NPIPB4C9JG80 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NPIPB4C9JG80 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 AL023875.1-201ENST00000640777 796 ntBASIC17.13■□□□□ 0.33
NPIPB4C9JG80 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 FEM1AP3-201ENST00000403722 1741 ntBASIC17.13■□□□□ 0.33
NPIPB4C9JG80 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.13■□□□□ 0.33
NPIPB4C9JG80 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 CD99P1-205ENST00000527459 561 ntBASIC17.12■□□□□ 0.33
NPIPB4C9JG80 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 AC110285.5-201ENST00000611501 352 ntBASIC17.12■□□□□ 0.33
NPIPB4C9JG80 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 AC073648.6-201ENST00000641589 218 ntBASIC17.12■□□□□ 0.33
NPIPB4C9JG80 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 IRX1P1-201ENST00000438849 1838 ntBASIC17.12■□□□□ 0.33
NPIPB4C9JG80 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NPIPB4C9JG80 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NPIPB4C9JG80 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms